CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH37076	Soybean	cytosol	78.42	92.37
KRH12076	Soybean	cytosol	78.42	89.34
GSMUA_Achr11P...	Banana	cytosol	41.73	75.32
GSMUA_Achr8P30040_001	Banana	cytosol	41.01	74.03
Solyc01g066590.2.1	Tomato	cytosol, extracellular	63.31	73.95
PGSC0003DMT400029467	Potato	extracellular	63.31	73.95
VIT_05s0077g02110.t01	Wine grape	cytosol	59.71	70.94
KRH37077	Soybean	mitochondrion	78.42	69.43
Zm00001d008330_P001	Maize	mitochondrion	51.8	59.02
Zm00001d040291_P001	Maize	cytosol, mitochondrion	53.24	57.81
EES00507	Sorghum	cytosol	53.96	57.69
Os01t0256400-01	Rice	cytosol, nucleus	53.96	57.69
TraesCS3D01G180700.1	Wheat	cytosol	53.96	53.19
TraesCS3B01G205000.1	Wheat	cytosol	53.96	53.19
TraesCS3A01G175300.1	Wheat	cytosol	53.96	53.19
KRH40947	Soybean	cytosol	19.42	52.94
GSMUA_AchrUn_...	Banana	cytosol	26.62	41.57
KRH27167	Soybean	cytosol	28.06	41.49
KRH60274	Soybean	cytosol	26.62	39.78
KRH25852	Soybean	cytosol	16.55	38.98
KRH41561	Soybean	cytosol	25.9	38.71
OQU83188	Sorghum	plastid	34.53	38.1
KRH23441	Soybean	cytosol	25.18	36.84
KRH09878	Soybean	cytosol	25.18	36.84
KRH55664	Soybean	cytosol, mitochondrion, peroxisome	28.78	36.7
Os06t0492700-00	Rice	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	32.37	32.61
KRH70126	Soybean	cytosol	29.5	30.83
KRH08469	Soybean	cytosol	28.78	30.77
KRH60372	Soybean	cytosol	27.34	28.57
KRH41675	Soybean	cytosol	27.34	28.57
KRH49195	Soybean	cytosol	20.86	25.89
KRH27230	Soybean	cytosol	28.06	25.66
KRH22104	Soybean	cytosol, plastid	28.06	24.84
KRH33092	Soybean	plastid	19.42	18.12
KRH20287	Soybean	cytosol	31.65	18.03
KRH03712	Soybean	cytosol	31.65	17.96
KRH03396	Soybean	cytosol	29.5	15.83
KRH56986	Soybean	cytosol	29.5	15.53
KRH40946	Soybean	plastid	9.35	11.21

Protein Annotations

EntrezGene:100527842	Gene3D:3.30.740.10	MapMan:35.1	UniProt:A0A0R0G137	EMBL:ACUP02009264	InterPro:DLC_sf
InterPro:Dynein_light_chain_typ-1/2	EnsemblPlantsGene:GLYMA_15G150100	GO:GO:0003674	GO:GO:0003774	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005856
GO:GO:0005868	GO:GO:0005874	GO:GO:0005875	GO:GO:0006810	GO:GO:0007017	GO:GO:0008092
GO:GO:0008150	GO:GO:0008574	GO:GO:0009987	GO:GO:0010970	GO:GO:0016043	GO:GO:0016787
GO:GO:0030286	GO:GO:0045505	GO:GO:0051959	GO:GO:0060271	GO:GO:2000582	InterPro:IPR037177
EnsemblPlants:KRH12077	ProteinID:KRH12077	ProteinID:KRH12077.1	PFAM:PF01221	PANTHER:PTHR11886	SMART:SM01375
SUPFAM:SSF54648	UniParc:UPI0003DEAB1D	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:+:12387474..12390951

Molecular Weight (calculated)

15728.7 Da

IEP (calculated)

7.566

GRAVY (calculated)

-0.454

Length

139 amino acids

Sequence
(BLAST)

001: MSEEAKKNFV GALTARPTSD DQKQAPALNV PPKKVIIKSA DMIPDMQKEA VDIAVAAFER YNVEKDVAEQ IKKEFDKRHG PTWHCIVGRN FAQYSQLAPA
101: QYYKVGCDVD IQGSYVTHET NHFVYFYLDQ KAVLLFKSG

Best Arabidopsis Sequence Match ( AT4G15930.1 )
(BLAST)

001: MSDGRRKKSV NGGAPAQTIL DDRRSSLPEV EASPPAGKRA VIKSADMKDD MQKEAIEIAI SAFEKYSVEK DIAENIKKEF DKKHGATWHC IVGRNFGSYV
101: THETNHFVYF YLDQKAVLLF KSG

Arabidopsis Description

At4g15930 [Source:UniProtKB/TrEMBL;Acc:Q84VW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.