CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60274	Soybean	cytosol	97.85	97.85
KRH09878	Soybean	cytosol	77.42	75.79
VIT_11s0016g03770.t01	Wine grape	cytosol	77.42	75.0
KRH23441	Soybean	cytosol	76.34	74.74
GSMUA_Achr2P19900_001	Banana	cytosol	73.12	73.12
GSMUA_Achr10P...	Banana	cytosol	72.04	72.04
GSMUA_Achr7P25190_001	Banana	cytosol	72.04	72.04
GSMUA_Achr7P14400_001	Banana	cytosol	69.89	69.89
KXG33416	Sorghum	cytosol	67.74	67.74
Zm00001d043386_P001	Maize	cytosol	66.67	66.67
TraesCS3D01G296300.1	Wheat	cytosol	67.74	63.64
TraesCS3A01G305600.1	Wheat	cytosol	66.67	62.63
TraesCS3B01G330900.1	Wheat	cytosol	66.67	62.63
TraesCS2B01G143000.1	Wheat	cytosol	65.59	61.62
TraesCS1D01G203800.1	Wheat	cytosol	65.59	61.62
TraesCS1B01G110900.1	Wheat	cytosol	65.59	61.62
GSMUA_Achr10P...	Banana	cytosol	66.67	60.78
TraesCS2A01G245600.1	Wheat	cytosol	64.52	60.61
Os02t0269200-01	Rice	cytosol	64.52	60.61
HORVU3Hr1G073190.1	Barley	cytosol	67.74	60.58
TraesCS5B01G340700.1	Wheat	cytosol	63.44	59.6
TraesCS2B01G427400.1	Wheat	cytosol	63.44	59.6
EES06648	Sorghum	cytosol	62.37	58.59
KRH25852	Soybean	cytosol	36.56	57.63
TraesCS7D01G056400.1	Wheat	cytosol	64.52	57.14
TraesCS7A01G061500.1	Wheat	cytosol	64.52	57.14
TraesCS4A01G427300.1	Wheat	cytosol	64.52	57.14
TraesCS7A01G284100.1	Wheat	cytosol, plastid	50.54	54.02
KRH27167	Soybean	cytosol	51.61	51.06
Zm00001d016016_P001	Maize	cytosol	63.44	49.17
KRH40947	Soybean	cytosol	25.81	47.06
KRH55664	Soybean	cytosol, mitochondrion, peroxisome	54.84	46.79
TraesCS4A01G428300.1	Wheat	cytosol	64.52	44.78
KRH49195	Soybean	cytosol	52.69	43.75
HORVU7Hr1G011400.2	Barley	plastid	64.52	37.04
KRH37076	Soybean	cytosol	38.71	30.51
KRH12076	Soybean	cytosol	37.63	28.69
KRH60372	Soybean	cytosol	39.78	27.82
KRH08469	Soybean	cytosol	38.71	27.69
KRH70126	Soybean	cytosol	38.71	27.07
KRH41675	Soybean	cytosol	38.71	27.07
KRH12077	Soybean	cytosol	38.71	25.9
KRH27230	Soybean	cytosol	38.71	23.68
KRH37077	Soybean	mitochondrion	37.63	22.29
KRH22104	Soybean	cytosol, plastid	36.56	21.66
KRH03712	Soybean	cytosol	46.24	17.55
KRH20287	Soybean	cytosol	44.09	16.8
KRH33092	Soybean	plastid	26.88	16.78
KRH03396	Soybean	cytosol	39.78	14.29
KRH56986	Soybean	cytosol	39.78	14.02
KRH40946	Soybean	plastid	13.98	11.21

Protein Annotations

EntrezGene:100500277	Gene3D:3.30.740.10	MapMan:35.2	EMBL:ACUP02004772	EMBL:BT091190	UniProt:C6T184
InterPro:DLC_sf	InterPro:Dynein_light_chain_typ-1/2	EnsemblPlantsGene:GLYMA_08G037900	GO:GO:0003674	GO:GO:0003774	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005856	GO:GO:0005868	GO:GO:0005874	GO:GO:0006810	GO:GO:0007017	GO:GO:0008092
GO:GO:0008150	GO:GO:0008574	GO:GO:0009987	GO:GO:0010970	GO:GO:0016043	GO:GO:0016787
GO:GO:0030286	GO:GO:0045505	GO:GO:0051959	GO:GO:0060271	GO:GO:2000582	InterPro:IPR037177
EnsemblPlants:KRH41561	ProteinID:KRH41561	ProteinID:KRH41561.1	PFAM:PF01221	PANTHER:PTHR11886	PANTHER:PTHR11886:SF47
SMART:SM01375	SUPFAM:SSF54648	TMHMM:TMhelix	UniParc:UPI0001B157AC	:	:

Description

hypothetical protein

Coordinates

chr8:-:2977493..2978709

Molecular Weight (calculated)

10256.3 Da

IEP (calculated)

6.217

GRAVY (calculated)

0.206

Length

93 amino acids

Sequence
(BLAST)

1: MLEGKAMVKE TDMSTKMQIH AMASASQALD LYDVYDCISI AAHIKKEFDS VYGNGWQCVV GSNFGCYFTH SSGTFIYFAL ATLNFLIFKG TSS

Best Arabidopsis Sequence Match ( AT1G52245.1 )
(BLAST)

1: MLEGKAMVED SDMPVKMQMQ AMAFASQALD LFDVFDCKSI AGHIKKEFDE RYGSGWQCVV GSNFGCFFTH SKGTFIYFQL ETLKFLIFKG ASTP

Arabidopsis Description

At1g52250 [Source:UniProtKB/TrEMBL;Acc:Q9M810]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.