CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH12076	Soybean	cytosol	77.07	99.18
KRH37076	Soybean	cytosol	71.34	94.92
KRH12077	Soybean	cytosol	69.43	78.42
Solyc01g066590.2.1	Tomato	cytosol, extracellular	58.6	77.31
PGSC0003DMT400029467	Potato	extracellular	58.6	77.31
GSMUA_Achr11P...	Banana	cytosol	37.58	76.62
GSMUA_Achr8P30040_001	Banana	cytosol	36.94	75.32
VIT_05s0077g02110.t01	Wine grape	cytosol	54.14	72.65
Zm00001d008330_P001	Maize	mitochondrion	48.41	62.3
EES00507	Sorghum	cytosol	50.32	60.77
Os01t0256400-01	Rice	cytosol, nucleus	50.32	60.77
Zm00001d040291_P001	Maize	cytosol, mitochondrion	49.04	60.16
TraesCS3D01G180700.1	Wheat	cytosol	49.68	55.32
TraesCS3B01G205000.1	Wheat	cytosol	49.68	55.32
TraesCS3A01G175300.1	Wheat	cytosol	49.68	55.32
KRH40947	Soybean	cytosol	17.2	52.94
OQU83188	Sorghum	plastid	32.48	40.48
GSMUA_AchrUn_...	Banana	cytosol	22.93	40.45
KRH27167	Soybean	cytosol	24.2	40.43
KRH60274	Soybean	cytosol	22.93	38.71
KRH41561	Soybean	cytosol	22.29	37.63
KRH25852	Soybean	cytosol	14.01	37.29
KRH23441	Soybean	cytosol	21.66	35.79
KRH09878	Soybean	cytosol	21.66	35.79
KRH55664	Soybean	cytosol, mitochondrion, peroxisome	24.84	35.78
Os06t0492700-00	Rice	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	29.94	34.06
KRH70126	Soybean	cytosol	26.11	30.83
KRH08469	Soybean	cytosol	25.48	30.77
KRH41675	Soybean	cytosol	24.2	28.57
KRH60372	Soybean	cytosol	24.2	28.57
KRH27230	Soybean	cytosol	24.2	25.0
KRH49195	Soybean	cytosol	17.83	25.0
KRH22104	Soybean	cytosol, plastid	24.84	24.84
KRH33092	Soybean	plastid	17.83	18.79
KRH20287	Soybean	cytosol	27.39	17.62
KRH03712	Soybean	cytosol	27.39	17.55
KRH03396	Soybean	cytosol	26.11	15.83
KRH56986	Soybean	cytosol	26.11	15.53
KRH40946	Soybean	plastid	7.64	10.34

Protein Annotations

EntrezGene:100805882	Gene3D:3.30.740.10	MapMan:35.1	EMBL:ACUP02005413	InterPro:DLC_sf	InterPro:Dynein_light_1/2_CS
InterPro:Dynein_light_chain_typ-1/2	EnsemblPlantsGene:GLYMA_09G043100	GO:GO:0003674	GO:GO:0003774	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005856
GO:GO:0005868	GO:GO:0005874	GO:GO:0005875	GO:GO:0006810	GO:GO:0007017	GO:GO:0008092
GO:GO:0008150	GO:GO:0008574	GO:GO:0009987	GO:GO:0010970	GO:GO:0016043	GO:GO:0016787
GO:GO:0030286	GO:GO:0045505	GO:GO:0051959	GO:GO:0060271	GO:GO:2000582	InterPro:IPR037177
UniProt:K7LBR9	EnsemblPlants:KRH37077	ProteinID:KRH37077	ProteinID:KRH37077.1	PFAM:PF01221	ScanProsite:PS01239
PANTHER:PTHR11886	SMART:SM01375	SUPFAM:SSF54648	UniParc:UPI0002338B85	SEG:seg	:

Description

hypothetical protein

Coordinates

chr9:-:3679245..3685039

Molecular Weight (calculated)

17848.4 Da

IEP (calculated)

10.124

GRAVY (calculated)

-0.642

Length

157 amino acids

Sequence
(BLAST)

001: MLLRRRRFDK TTPLATALPQ KLTHHQSSFR ETERKMSEDA KKNIAGALTA RPNSDDQKPS PLPSPAPAVP PKKVIIKSAD MIPDMQKEAV DIAVAAFEKY
101: NVEKDVAEQI KKEFDKRHGP TWHCIVGRNF GSYVTHETNH FVYFYLDQKA VLLFKSG

Best Arabidopsis Sequence Match ( AT4G15930.1 )
(BLAST)

001: MSDGRRKKSV NGGAPAQTIL DDRRSSLPEV EASPPAGKRA VIKSADMKDD MQKEAIEIAI SAFEKYSVEK DIAENIKKEF DKKHGATWHC IVGRNFGSYV
101: THETNHFVYF YLDQKAVLLF KSG

Arabidopsis Description

At4g15930 [Source:UniProtKB/TrEMBL;Acc:Q84VW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.