Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH27167 | Soybean | cytosol | 89.83 | 56.38 |
| KRH55664 | Soybean | cytosol, mitochondrion, peroxisome | 94.92 | 51.38 |
| VIT_19s0014g03710.t01 | Wine grape | cytosol | 91.53 | 49.54 |
| Solyc07g063610.2.1 | Tomato | cytosol | 84.75 | 44.25 |
| CDY29301 | Canola | cytosol | 74.58 | 43.56 |
| Bra026356.1-P | Field mustard | cytosol | 74.58 | 43.56 |
| CDX89255 | Canola | cytosol | 74.58 | 43.56 |
| AT4G27360.1 | Thale cress | cytosol | 74.58 | 42.72 |
| PGSC0003DMT400049549 | Potato | cytosol | 84.75 | 41.32 |
| GSMUA_Achr2P14130_001 | Banana | cytosol | 74.58 | 40.37 |
| GSMUA_Achr9P29930_001 | Banana | cytosol | 74.58 | 39.29 |
| KRH60274 | Soybean | cytosol | 57.63 | 36.56 |
| KRH41561 | Soybean | cytosol | 57.63 | 36.56 |
| KRH09878 | Soybean | cytosol | 57.63 | 35.79 |
| EER97375 | Sorghum | cytosol | 67.8 | 35.09 |
| KRH23441 | Soybean | cytosol | 55.93 | 34.74 |
| GSMUA_Achr3P22950_001 | Banana | cytosol, mitochondrion | 67.8 | 28.37 |
| KRH49195 | Soybean | cytosol | 47.46 | 25.0 |
| KRH37076 | Soybean | cytosol | 38.98 | 19.49 |
| KRH12076 | Soybean | cytosol | 37.29 | 18.03 |
| KRH12077 | Soybean | cytosol | 38.98 | 16.55 |
| KRH60372 | Soybean | cytosol | 32.2 | 14.29 |
| KRH41675 | Soybean | cytosol | 32.2 | 14.29 |
| KRH37077 | Soybean | mitochondrion | 37.29 | 14.01 |
| KRH08469 | Soybean | cytosol | 30.51 | 13.85 |
| KRH40947 | Soybean | cytosol | 11.86 | 13.73 |
| KRH70126 | Soybean | cytosol | 30.51 | 13.53 |
| KRH27230 | Soybean | cytosol | 32.2 | 12.5 |
| KRH22104 | Soybean | cytosol, plastid | 28.81 | 10.83 |
| KRH03712 | Soybean | cytosol | 40.68 | 9.8 |
| KRH20287 | Soybean | cytosol | 38.98 | 9.43 |
| KRH03396 | Soybean | cytosol | 35.59 | 8.11 |
| KRH56986 | Soybean | cytosol | 35.59 | 7.95 |
| KRH33092 | Soybean | plastid | 13.56 | 5.37 |
| KRH40946 | Soybean | plastid | 5.08 | 2.59 |
Protein Annotations
| Gene3D:3.30.740.10 | MapMan:35.2 | UniProt:A0A0R0H4T2 | EMBL:ACUP02007360 | InterPro:DLC_sf | InterPro:Dynein_light_chain_typ-1/2 |
| EnsemblPlantsGene:GLYMA_12G134200 | GO:GO:0003674 | GO:GO:0003774 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005856 | GO:GO:0005874 | GO:GO:0007017 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0030286 | InterPro:IPR037177 | EnsemblPlants:KRH25852 | ProteinID:KRH25852 |
| ProteinID:KRH25852.1 | PFAM:PF01221 | PANTHER:PTHR11886 | PANTHER:PTHR11886:SF22 | SMART:SM01375 | SUPFAM:SSF54648 |
| UniParc:UPI00023D003B | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr12:-:15515040..15516516
Molecular Weight (calculated)
6710.1 Da
IEP (calculated)
4.267
GRAVY (calculated)
-0.210
Length
59 amino acids
Sequence
(BLAST)
(BLAST)
1: MLEGKAVIGE TDMLQTMQQD ATDLASKALD FFDVTEAIEI ARFIKKEFDR MHGPGWQCM
001: MLEGKAVMGD TDMKQTMKED ALSLASKALD CFDVTEPTQI ARFIKKEFDR SYGSGWQCIV GTHFGSFVTH CSGCFIHFSV GSLTILLFKG SVGEPAPPDR
101: CSS
101: CSS
Arabidopsis Description
Dynein light chain type 1 family protein [Source:UniProtKB/TrEMBL;Acc:Q8VZW5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.