Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 3
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P14130_001 | Banana | cytosol | 71.05 | 74.31 |
| KRH27167 | Soybean | cytosol | 60.53 | 73.4 |
| VIT_19s0014g03710.t01 | Wine grape | cytosol | 64.91 | 67.89 |
| KRH55664 | Soybean | cytosol, mitochondrion, peroxisome | 64.91 | 67.89 |
| KRH25852 | Soybean | cytosol | 35.09 | 67.8 |
| GSMUA_Achr9P29930_001 | Banana | cytosol | 64.04 | 65.18 |
| AT4G27360.1 | Thale cress | cytosol | 58.77 | 65.05 |
| Solyc07g063610.2.1 | Tomato | cytosol | 64.04 | 64.6 |
| Bra026356.1-P | Field mustard | cytosol | 57.02 | 64.36 |
| CDY29301 | Canola | cytosol | 57.02 | 64.36 |
| CDX89255 | Canola | cytosol | 57.02 | 64.36 |
| PGSC0003DMT400049549 | Potato | cytosol | 64.04 | 60.33 |
| KXG33416 | Sorghum | cytosol | 42.11 | 51.61 |
| EES06648 | Sorghum | cytosol | 44.74 | 51.52 |
| GSMUA_Achr3P22950_001 | Banana | cytosol, mitochondrion | 54.39 | 43.97 |
| EES00507 | Sorghum | cytosol | 35.09 | 30.77 |
| EES05573 | Sorghum | cytosol | 34.21 | 24.68 |
| OQU83188 | Sorghum | plastid | 27.19 | 24.6 |
| OQU86998 | Sorghum | cytosol, mitochondrion | 35.09 | 21.16 |
| EES07042 | Sorghum | cytosol, mitochondrion | 35.96 | 20.3 |
| EES10953 | Sorghum | plastid | 33.33 | 11.62 |
Protein Annotations
| Gene3D:3.30.740.10 | MapMan:35.1 | EntrezGene:8056332 | UniProt:C5XBJ7 | InterPro:DLC_sf | InterPro:Dynein_light_chain_typ-1/2 |
| EnsemblPlants:EER97375 | ProteinID:EER97375 | ProteinID:EER97375.1 | GO:GO:0003674 | GO:GO:0003774 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005856 | GO:GO:0005868 | GO:GO:0005874 | GO:GO:0006810 | GO:GO:0007017 | GO:GO:0008092 |
| GO:GO:0008150 | GO:GO:0008574 | GO:GO:0009987 | GO:GO:0010970 | GO:GO:0016043 | GO:GO:0016787 |
| GO:GO:0030286 | GO:GO:0045505 | GO:GO:0051959 | GO:GO:0060271 | GO:GO:2000582 | InterPro:IPR037177 |
| PFAM:PF01221 | PANTHER:PTHR11886 | PANTHER:PTHR11886:SF22 | SMART:SM01375 | EnsemblPlantsGene:SORBI_3002G338800 | SUPFAM:SSF54648 |
| unigene:Sbi.7842 | UniParc:UPI0001A836BA | RefSeq:XP_002460854.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:70603556..70604752
Molecular Weight (calculated)
12409.9 Da
IEP (calculated)
5.709
GRAVY (calculated)
0.022
Length
114 amino acids
Sequence
(BLAST)
(BLAST)
001: MLESQAVIGD TDMRQAMQQY ALRLAGKALD DFEAADSTEI ARFIKKEFDR SYGPGWQCIV GTDFGSFVTH HSGCFIYFGI GNLAILLFKG GAAPRGETVV
101: EKARLTALKT AVEA
101: EKARLTALKT AVEA
001: MLEGKAVMGD TDMKQTMKED ALSLASKALD CFDVTEPTQI ARFIKKEFDR SYGSGWQCIV GTHFGSFVTH CSGCFIHFSV GSLTILLFKG SVGEPAPPDR
101: CSS
101: CSS
Arabidopsis Description
Dynein light chain type 1 family protein [Source:UniProtKB/TrEMBL;Acc:Q8VZW5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.