Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH25852 | Soybean | cytosol | 49.54 | 91.53 |
| KRH27167 | Soybean | cytosol | 77.98 | 90.43 |
| KRH55664 | Soybean | cytosol, mitochondrion, peroxisome | 80.73 | 80.73 |
| Solyc07g063610.2.1 | Tomato | cytosol | 79.82 | 76.99 |
| GSMUA_Achr2P14130_001 | Banana | cytosol | 74.31 | 74.31 |
| PGSC0003DMT400049549 | Potato | cytosol | 79.82 | 71.9 |
| Bra026356.1-P | Field mustard | cytosol | 66.06 | 71.29 |
| CDY29301 | Canola | cytosol | 66.06 | 71.29 |
| CDX89255 | Canola | cytosol | 66.06 | 71.29 |
| AT4G27360.1 | Thale cress | cytosol | 66.06 | 69.9 |
| GSMUA_Achr9P29930_001 | Banana | cytosol | 67.89 | 66.07 |
| EER97375 | Sorghum | cytosol | 67.89 | 64.91 |
| VIT_11s0016g03770.t01 | Wine grape | cytosol | 45.87 | 52.08 |
| VIT_09s0002g04280.t01 | Wine grape | cytosol | 44.95 | 51.58 |
| GSMUA_Achr3P22950_001 | Banana | cytosol, mitochondrion | 58.72 | 45.39 |
| VIT_08s0007g01270.t01 | Wine grape | cytosol | 34.86 | 37.62 |
| VIT_05s0077g02110.t01 | Wine grape | cytosol | 36.7 | 34.19 |
| VIT_19s0014g02850.t01 | Wine grape | cytosol | 39.45 | 31.85 |
| VIT_01s0011g05480.t01 | Wine grape | cytosol | 36.7 | 31.5 |
| VIT_16s0022g00440.t01 | Wine grape | cytosol | 38.53 | 27.45 |
| VIT_17s0000g05380.t01 | Wine grape | cytosol | 38.53 | 22.7 |
| VIT_11s0016g05000.t01 | Wine grape | cytosol, nucleus, plastid | 36.7 | 22.1 |
Protein Annotations
| EntrezGene:100262405 | wikigene:100262405 | Gene3D:3.30.740.10 | MapMan:35.2 | ProteinID:CBI20381 | ProteinID:CBI20381.3 |
| InterPro:DLC_sf | InterPro:Dynein_light_chain_typ-1/2 | UniProt:E0CST2 | EMBL:FN595229 | GO:GO:0003674 | GO:GO:0003774 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005856 | GO:GO:0005868 | GO:GO:0005874 | GO:GO:0006810 | GO:GO:0007017 |
| GO:GO:0008092 | GO:GO:0008150 | GO:GO:0008574 | GO:GO:0009987 | GO:GO:0010970 | GO:GO:0016043 |
| GO:GO:0016787 | GO:GO:0030286 | GO:GO:0045505 | GO:GO:0051959 | GO:GO:0060271 | GO:GO:2000582 |
| InterPro:IPR037177 | EntrezGene:LOC100262405 | wikigene:LOC100262405 | PFAM:PF01221 | PANTHER:PTHR11886 | PANTHER:PTHR11886:SF22 |
| SMART:SM01375 | SUPFAM:SSF54648 | UniParc:UPI00015C78DD | ArrayExpress:VIT_19s0014g03710 | EnsemblPlantsGene:VIT_19s0014g03710 | EnsemblPlants:VIT_19s0014g03710.t01 |
| RefSeq:XP_002281713 | RefSeq:XP_002281713.1 | SEG:seg | : | : | : |
Description
Dynein light chain [Source:UniProtKB/TrEMBL;Acc:E0CST2]
Coordinates
chr19:-:3837685..3838138
Molecular Weight (calculated)
11966.4 Da
IEP (calculated)
4.584
GRAVY (calculated)
0.187
Length
109 amino acids
Sequence
(BLAST)
(BLAST)
001: MLEGKAVIGE TDMLQTMQQD ALDLAAKALD FFDVTEATEI ARFIKKEFDR THGPGWQCIV GTDFGSFVTH CYGCFIYFRI ASLAILLFKG SAGPEAQANQ
101: IPVLESVKA
101: IPVLESVKA
001: MLEGKAVMGD TDMKQTMKED ALSLASKALD CFDVTEPTQI ARFIKKEFDR SYGSGWQCIV GTHFGSFVTH CSGCFIHFSV GSLTILLFKG SVGEPAPPDR
101: CSS
101: CSS
Arabidopsis Description
Dynein light chain type 1 family protein [Source:UniProtKB/TrEMBL;Acc:Q8VZW5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.