Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g063180.2.1 | Tomato | cytosol | 57.78 | 53.06 |
| PGSC0003DMT400032411 | Potato | cytosol, mitochondrion, nucleus, plastid | 57.04 | 52.38 |
| VIT_16s0022g00440.t01 | Wine grape | cytosol | 57.04 | 50.33 |
| KRH27230 | Soybean | cytosol | 55.56 | 49.34 |
| VIT_01s0011g05480.t01 | Wine grape | cytosol | 45.93 | 48.82 |
| KRH22104 | Soybean | cytosol, plastid | 54.81 | 47.13 |
| VIT_19s0014g03710.t01 | Wine grape | cytosol | 31.85 | 39.45 |
| VIT_09s0002g04280.t01 | Wine grape | cytosol | 26.67 | 37.89 |
| VIT_11s0016g03770.t01 | Wine grape | cytosol | 26.67 | 37.5 |
| VIT_08s0007g01270.t01 | Wine grape | cytosol | 25.19 | 33.66 |
| VIT_05s0077g02110.t01 | Wine grape | cytosol | 28.89 | 33.33 |
| VIT_17s0000g05380.t01 | Wine grape | cytosol | 43.7 | 31.89 |
| VIT_11s0016g05000.t01 | Wine grape | cytosol, nucleus, plastid | 39.26 | 29.28 |
Protein Annotations
| EntrezGene:100257280 | wikigene:100257280 | Gene3D:3.30.740.10 | MapMan:35.2 | ProteinID:CCB46348 | ProteinID:CCB46348.1 |
| InterPro:DLC_sf | InterPro:Dynein_light_chain_typ-1/2 | UniProt:F6H252 | EMBL:FN595229 | GO:GO:0003674 | GO:GO:0003774 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005856 | GO:GO:0005868 | GO:GO:0005874 | GO:GO:0006810 | GO:GO:0007017 |
| GO:GO:0008092 | GO:GO:0008150 | GO:GO:0008574 | GO:GO:0009987 | GO:GO:0010970 | GO:GO:0016043 |
| GO:GO:0016787 | GO:GO:0030286 | GO:GO:0045505 | GO:GO:0051959 | GO:GO:0060271 | GO:GO:2000582 |
| InterPro:IPR037177 | EntrezGene:LOC100257280 | wikigene:LOC100257280 | PFAM:PF01221 | PANTHER:PTHR11886 | PANTHER:PTHR11886:SF49 |
| SMART:SM01375 | SUPFAM:SSF54648 | UniParc:UPI0001985737 | ArrayExpress:VIT_19s0014g02850 | EnsemblPlantsGene:VIT_19s0014g02850 | EnsemblPlants:VIT_19s0014g02850.t01 |
| RefSeq:XP_002282291 | RefSeq:XP_002282291.1 | RefSeq:XP_002282291.3 | : | : | : |
Description
Dynein light chain [Source:UniProtKB/TrEMBL;Acc:F6H252]
Coordinates
chr19:-:2949293..2950681
Molecular Weight (calculated)
15076.2 Da
IEP (calculated)
9.505
GRAVY (calculated)
-0.203
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKTEEMKEK QVAQMPSQRR IAPNLEVKLA AIAISLNVRL RSSDMPPAMQ DHALRYSRSL VDAIPDATRP NPSHIARALK KEFDSVYGPA WHCVAGTSFG
101: SFVTHSPGGF VYFSIDSLYI LLFKTEVKLV TEPRA
101: SFVTHSPGGF VYFSIDSLYI LLFKTEVKLV TEPRA
001: MEGVELELER RSKFLNSLIQ KKKAKEQQDQ KDEFNVRVRA SDMPLPQQNR AFSLSREILN ATPGKADNKR LAHALKKDFD SAYGPAWHCI VGTSFGSYVT
101: HSTGGFLYFQ IDKVYVLLFK TAVEPLDQK
101: HSTGGFLYFQ IDKVYVLLFK TAVEPLDQK
Arabidopsis Description
Dynein light chain type 1 family protein [Source:UniProtKB/TrEMBL;Acc:Q9LR39]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.