Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH60274 | Soybean | cytosol | 76.04 | 78.49 |
| KRH41561 | Soybean | cytosol | 75.0 | 77.42 |
| VIT_09s0002g04280.t01 | Wine grape | cytosol | 76.04 | 76.84 |
| GSMUA_Achr2P19900_001 | Banana | cytosol | 69.79 | 72.04 |
| GSMUA_Achr10P... | Banana | cytosol | 68.75 | 70.97 |
| GSMUA_Achr7P25190_001 | Banana | cytosol | 67.71 | 69.89 |
| GSMUA_Achr7P14400_001 | Banana | cytosol | 66.67 | 68.82 |
| KXG33416 | Sorghum | cytosol | 65.62 | 67.74 |
| Zm00001d043386_P001 | Maize | cytosol | 64.58 | 66.67 |
| GSMUA_Achr10P... | Banana | cytosol | 66.67 | 62.75 |
| TraesCS1D01G203800.1 | Wheat | cytosol | 64.58 | 62.63 |
| TraesCS3A01G305600.1 | Wheat | cytosol | 64.58 | 62.63 |
| TraesCS3B01G330900.1 | Wheat | cytosol | 64.58 | 62.63 |
| TraesCS3D01G296300.1 | Wheat | cytosol | 64.58 | 62.63 |
| TraesCS1B01G110900.1 | Wheat | cytosol | 63.54 | 61.62 |
| TraesCS2A01G245600.1 | Wheat | cytosol | 63.54 | 61.62 |
| TraesCS2B01G143000.1 | Wheat | cytosol | 62.5 | 60.61 |
| HORVU3Hr1G073190.1 | Barley | cytosol | 65.62 | 60.58 |
| Os02t0269200-01 | Rice | cytosol | 60.42 | 58.59 |
| TraesCS2B01G427400.1 | Wheat | cytosol | 60.42 | 58.59 |
| TraesCS5B01G340700.1 | Wheat | cytosol | 60.42 | 58.59 |
| TraesCS7A01G284100.1 | Wheat | cytosol, plastid | 52.08 | 57.47 |
| TraesCS7A01G061500.1 | Wheat | cytosol | 62.5 | 57.14 |
| TraesCS7D01G056400.1 | Wheat | cytosol | 62.5 | 57.14 |
| TraesCS4A01G427300.1 | Wheat | cytosol | 62.5 | 57.14 |
| EES06648 | Sorghum | cytosol | 58.33 | 56.57 |
| Zm00001d016016_P001 | Maize | cytosol | 61.46 | 49.17 |
| VIT_19s0014g03710.t01 | Wine grape | cytosol | 52.08 | 45.87 |
| TraesCS4A01G428300.1 | Wheat | cytosol | 62.5 | 44.78 |
| VIT_08s0007g01270.t01 | Wine grape | cytosol | 40.62 | 38.61 |
| HORVU7Hr1G011400.2 | Barley | plastid | 61.46 | 36.42 |
| VIT_05s0077g02110.t01 | Wine grape | cytosol | 37.5 | 30.77 |
| VIT_01s0011g05480.t01 | Wine grape | cytosol | 36.46 | 27.56 |
| VIT_19s0014g02850.t01 | Wine grape | cytosol | 37.5 | 26.67 |
| VIT_16s0022g00440.t01 | Wine grape | cytosol | 39.58 | 24.84 |
| VIT_11s0016g05000.t01 | Wine grape | cytosol, nucleus, plastid | 41.67 | 22.1 |
| VIT_17s0000g05380.t01 | Wine grape | cytosol | 39.58 | 20.54 |
Protein Annotations
| EntrezGene:100245613 | wikigene:100245613 | Gene3D:3.30.740.10 | MapMan:35.2 | ProteinID:CBI28057 | ProteinID:CBI28057.3 |
| UniProt:D7TBM2 | InterPro:DLC_sf | InterPro:Dynein_light_chain_typ-1/2 | EMBL:FN595756 | GO:GO:0003674 | GO:GO:0003774 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005856 | GO:GO:0005868 | GO:GO:0005874 | GO:GO:0006810 | GO:GO:0007017 |
| GO:GO:0008092 | GO:GO:0008150 | GO:GO:0008574 | GO:GO:0009987 | GO:GO:0010970 | GO:GO:0016043 |
| GO:GO:0016787 | GO:GO:0030286 | GO:GO:0045505 | GO:GO:0051959 | GO:GO:0060271 | GO:GO:2000582 |
| InterPro:IPR037177 | EntrezGene:LOC100245613 | wikigene:LOC100245613 | PFAM:PF01221 | PANTHER:PTHR11886 | PANTHER:PTHR11886:SF47 |
| SMART:SM01375 | SUPFAM:SSF54648 | UniParc:UPI00015C8323 | ArrayExpress:VIT_11s0016g03770 | EnsemblPlantsGene:VIT_11s0016g03770 | EnsemblPlants:VIT_11s0016g03770.t01 |
| RefSeq:XP_002280869 | RefSeq:XP_002280869.1 | SEG:seg | : | : | : |
Description
Dynein light chain [Source:UniProtKB/TrEMBL;Acc:D7TBM2]
Coordinates
chr11:-:3082194..3082576
Molecular Weight (calculated)
10473.6 Da
IEP (calculated)
5.601
GRAVY (calculated)
0.209
Length
96 amino acids
Sequence
(BLAST)
(BLAST)
1: MLEGKAVIKE SDMPVKMQKQ AMASASQALD IYDVSDCVSI AAHIKKEFDG LFGCGWQCVV GSNFGCFFTH SQGTFIYFAM ETLNFLVFKA PSSSPS
1: MLEGKAMVED SDMPVKMQMQ AMAFASQALD LFDVFDCKSI AGHIKKEFDE RYGSGWQCVV GSNFGCFFTH SKGTFIYFQL ETLKFLIFKG ASTP
Arabidopsis Description
At1g52250 [Source:UniProtKB/TrEMBL;Acc:Q9M810]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.