Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH60372 | Soybean | cytosol | 87.4 | 83.46 |
| KRH41675 | Soybean | cytosol | 84.25 | 80.45 |
| PGSC0003DMT400081918 | Potato | cytosol | 81.1 | 79.23 |
| Solyc01g005460.2.1 | Tomato | cytosol | 79.53 | 77.69 |
| CDY41457 | Canola | cytosol | 78.74 | 76.92 |
| KRH70126 | Soybean | cytosol | 80.31 | 76.69 |
| CDX91705 | Canola | cytosol | 77.95 | 76.15 |
| KRH08469 | Soybean | cytosol | 77.95 | 76.15 |
| AT1G23220.1 | Thale cress | cytosol | 77.17 | 75.97 |
| Bra012367.1-P | Field mustard | cytosol | 77.17 | 75.38 |
| CDY21425 | Canola | cytosol | 74.8 | 73.08 |
| Bra024572.1-P | Field mustard | cytosol | 74.8 | 73.08 |
| CDY04736 | Canola | cytosol | 74.8 | 73.08 |
| CDY25775 | Canola | cytosol | 77.95 | 72.26 |
| CDY12479 | Canola | cytosol | 77.17 | 71.53 |
| GSMUA_Achr7P12500_001 | Banana | cytosol | 75.59 | 66.21 |
| GSMUA_Achr1P20660_001 | Banana | cytosol | 70.87 | 66.18 |
| GSMUA_Achr9P27210_001 | Banana | nucleus | 73.23 | 61.18 |
| TraesCS6D01G275800.1 | Wheat | cytosol | 61.42 | 54.93 |
| TraesCS6B01G325300.1 | Wheat | cytosol | 62.99 | 54.05 |
| TraesCS6A01G295200.1 | Wheat | cytosol | 62.2 | 53.38 |
| Zm00001d051789_P002 | Maize | cytosol | 62.99 | 51.61 |
| Zm00001d017947_P001 | Maize | cytosol, mitochondrion | 62.2 | 51.3 |
| Os02t0733001-00 | Rice | cytosol, mitochondrion, peroxisome | 62.99 | 50.0 |
| TraesCS2D01G325700.1 | Wheat | cytosol | 67.72 | 50.0 |
| EES05573 | Sorghum | cytosol | 62.2 | 50.0 |
| TraesCS2A01G337200.1 | Wheat | cytosol | 67.72 | 49.14 |
| TraesCS2B01G344700.1 | Wheat | cytosol | 67.72 | 49.14 |
| Zm00001d003400_P001 | Maize | cytosol | 65.35 | 46.11 |
| VIT_19s0014g02850.t01 | Wine grape | cytosol | 48.82 | 45.93 |
| Os04t0462600-01 | Rice | cytosol | 68.5 | 45.79 |
| Zm00001d050905_P001 | Maize | cytosol | 69.29 | 45.36 |
| EES07042 | Sorghum | cytosol, mitochondrion | 70.08 | 44.06 |
| Os02t0580400-01 | Rice | cytosol | 68.5 | 43.72 |
| VIT_16s0022g00440.t01 | Wine grape | cytosol | 51.18 | 42.48 |
| TraesCS6D01G189000.1 | Wheat | cytosol | 68.5 | 41.83 |
| TraesCS6B01G224400.1 | Wheat | cytosol | 67.72 | 41.55 |
| VIT_09s0002g04280.t01 | Wine grape | cytosol | 29.13 | 38.95 |
| VIT_19s0014g03710.t01 | Wine grape | cytosol | 31.5 | 36.7 |
| VIT_11s0016g03770.t01 | Wine grape | cytosol | 27.56 | 36.46 |
| VIT_08s0007g01270.t01 | Wine grape | cytosol | 26.77 | 33.66 |
| Zm00001d016977_P002 | Maize | cytosol | 68.5 | 32.83 |
| VIT_05s0077g02110.t01 | Wine grape | cytosol | 29.13 | 31.62 |
| VIT_11s0016g05000.t01 | Wine grape | cytosol, nucleus, plastid | 44.88 | 31.49 |
| VIT_17s0000g05380.t01 | Wine grape | cytosol | 44.88 | 30.81 |
| EES10953 | Sorghum | plastid | 65.35 | 25.38 |
Protein Annotations
| EntrezGene:100245790 | wikigene:100245790 | Gene3D:3.30.740.10 | MapMan:35.2 | ProteinID:CCB50799 | ProteinID:CCB50799.1 |
| InterPro:DLC_sf | InterPro:Dynein_light_chain_typ-1/2 | UniProt:F6HFF0 | EMBL:FN595752 | GO:GO:0003674 | GO:GO:0003774 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005856 | GO:GO:0005868 | GO:GO:0005874 | GO:GO:0006810 | GO:GO:0007017 |
| GO:GO:0008092 | GO:GO:0008150 | GO:GO:0008574 | GO:GO:0009987 | GO:GO:0010970 | GO:GO:0016043 |
| GO:GO:0016787 | GO:GO:0030286 | GO:GO:0045505 | GO:GO:0051959 | GO:GO:0060271 | GO:GO:2000582 |
| InterPro:IPR037177 | EntrezGene:LOC100245790 | wikigene:LOC100245790 | PFAM:PF01221 | PANTHER:PTHR11886 | PANTHER:PTHR11886:SF39 |
| SMART:SM01375 | SUPFAM:SSF54648 | UniParc:UPI000198288F | ArrayExpress:VIT_01s0011g05480 | EnsemblPlantsGene:VIT_01s0011g05480 | EnsemblPlants:VIT_01s0011g05480.t01 |
| unigene:Vvi.13597 | RefSeq:XP_002284827 | RefSeq:XP_002284827.1 | : | : | : |
Description
Dynein light chain [Source:UniProtKB/TrEMBL;Acc:F6HFF0]
Coordinates
chr1:+:5131536..5135169
Molecular Weight (calculated)
14334.3 Da
IEP (calculated)
8.703
GRAVY (calculated)
-0.247
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMGGAEEEL ERRSKFLSSL IQKKKATEQH DHLNVRVRAS DMPLALQSRA FKCARDNLDA MPGKLDSKRL ALALKKEFDS LYGPAWHCIV GTSFGSYVTH
101: SLGGFLYFSI DKVYILLFKT AVEPLDH
101: SLGGFLYFSI DKVYILLFKT AVEPLDH
001: MEGVELELER RSKFLNSLIQ KKKAKEQQDQ KDEFNVRVRA SDMPLPQQNR AFSLSREILN ATPGKADNKR LAHALKKDFD SAYGPAWHCI VGTSFGSYVT
101: HSTGGFLYFQ IDKVYVLLFK TAVEPLDQK
101: HSTGGFLYFQ IDKVYVLLFK TAVEPLDQK
Arabidopsis Description
Dynein light chain type 1 family protein [Source:UniProtKB/TrEMBL;Acc:Q9LR39]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.