Factsheet for Os02t0733001-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 3
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G275800.1	Wheat	cytosol	75.62	85.21
TraesCS6B01G325300.1	Wheat	cytosol	77.5	83.78
TraesCS6A01G295200.1	Wheat	cytosol	75.0	81.08
Zm00001d051789_P002	Maize	cytosol	75.62	78.06
Zm00001d017947_P001	Maize	cytosol, mitochondrion	75.0	77.92
EES05573	Sorghum	cytosol	76.25	77.22
VIT_01s0011g05480.t01	Wine grape	cytosol	50.0	62.99
KRH70126	Soybean	cytosol	48.75	58.65
KRH08469	Soybean	cytosol	47.5	58.46
KRH60372	Soybean	cytosol	48.12	57.89
KRH41675	Soybean	cytosol	48.12	57.89
PGSC0003DMT400081918	Potato	cytosol	46.88	57.69
Solyc01g005460.2.1	Tomato	cytosol	45.62	56.15
GSMUA_Achr1P20660_001	Banana	cytosol	47.5	55.88
CDY41457	Canola	cytosol	43.75	53.85
CDX91705	Canola	cytosol	43.75	53.85
GSMUA_Achr7P12500_001	Banana	cytosol	48.12	53.1
Bra012367.1-P	Field mustard	cytosol	43.12	53.08
AT1G23220.1	Thale cress	cytosol	42.5	52.71
Bra024572.1-P	Field mustard	cytosol	41.88	51.54
CDY04736	Canola	cytosol	41.88	51.54
CDY21425	Canola	cytosol	41.88	51.54
GSMUA_Achr9P27210_001	Banana	nucleus	48.75	51.32
CDY12479	Canola	cytosol	43.12	50.37
CDY25775	Canola	cytosol	43.12	50.37
Os04t0462600-01	Rice	cytosol	55.62	46.84
Os02t0580400-01	Rice	cytosol	55.0	44.22
Os02t0269200-01	Rice	cytosol	21.88	35.35
Os01t0256400-01	Rice	cytosol, nucleus	24.38	30.0
Os01t0555600-00	Rice	cytosol	35.62	26.76
Os06t0492700-00	Rice	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	16.25	18.84

Protein Annotations

EntrezGene:107278228	Gene3D:3.30.740.10	MapMan:35.2	UniProt:A0A0P0VPL3	ProteinID:BAS80774.1	InterPro:DLC_sf
InterPro:Dynein_light_chain_typ-1/2	GO:GO:0003674	GO:GO:0003774	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005856	GO:GO:0005868
GO:GO:0005874	GO:GO:0006810	GO:GO:0007017	GO:GO:0008092	GO:GO:0008150	GO:GO:0008574
GO:GO:0009987	GO:GO:0010970	GO:GO:0016043	GO:GO:0016787	GO:GO:0030286	GO:GO:0045505
GO:GO:0051959	GO:GO:0060271	GO:GO:2000582	InterPro:IPR037177	EnsemblPlantsGene:Os02g0733001	EnsemblPlants:Os02t0733001-00
PFAM:PF01221	PANTHER:PTHR11886	PANTHER:PTHR11886:SF39	SMART:SM01375	SUPFAM:SSF54648	UniParc:UPI0003939C38
RefSeq:XP_015625119.1	SEG:seg	:	:	:	:

Description

Similar to microtubule motor. (Os02t0733001-00)

Coordinates

chr2:-:30561276..30563576

Molecular Weight (calculated)

17079.5 Da

IEP (calculated)

9.592

GRAVY (calculated)

-0.231

Length

160 amino acids

Sequence
(BLAST)

001: MREQEEGGLQ AAGRRGGVVR ALLGLGAIAE GAAAAEGGLP RKAGAGDGGG EERKAVVRVV AADMPPALQR RAFRCARDEL AGMPRSPRRL EPKRLALALK
101: KEFDTAYGPA WHCIVGTSFG SYVTHARGGF LYFSVDKVYI LLFRTAVEPQ PHCEDQTVSS

Best Arabidopsis Sequence Match ( AT1G23220.1 )
(BLAST)

001: MEGVELELER RSKFLNSLIQ KKKAKEQQDQ KDEFNVRVRA SDMPLPQQNR AFSLSREILN ATPGKADNKR LAHALKKDFD SAYGPAWHCI VGTSFGSYVT
101: HSTGGFLYFQ IDKVYVLLFK TAVEPLDQK

Arabidopsis Description

Dynein light chain type 1 family protein [Source:UniProtKB/TrEMBL;Acc:Q9LR39]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.