Factsheet for Zm00001d051789_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05573	Sorghum	cytosol	94.19	92.41
Zm00001d017947_P001	Maize	cytosol, mitochondrion	89.03	89.61
TraesCS6D01G275800.1	Wheat	cytosol	79.35	86.62
TraesCS6B01G325300.1	Wheat	cytosol	80.65	84.46
TraesCS6A01G295200.1	Wheat	cytosol	78.06	81.76
Os02t0733001-00	Rice	cytosol, mitochondrion, peroxisome	78.06	75.62
VIT_01s0011g05480.t01	Wine grape	cytosol	51.61	62.99
KRH70126	Soybean	cytosol	50.32	58.65
KRH41675	Soybean	cytosol	50.32	58.65
KRH08469	Soybean	cytosol	49.03	58.46
PGSC0003DMT400081918	Potato	cytosol	48.39	57.69
GSMUA_Achr1P20660_001	Banana	cytosol	50.32	57.35
KRH60372	Soybean	cytosol	49.03	57.14
Solyc01g005460.2.1	Tomato	cytosol	47.1	56.15
CDY41457	Canola	cytosol	45.81	54.62
Bra012367.1-P	Field mustard	cytosol	45.16	53.85
CDX91705	Canola	cytosol	45.16	53.85
AT1G23220.1	Thale cress	cytosol	44.52	53.49
GSMUA_Achr7P12500_001	Banana	cytosol	49.68	53.1
CDY21425	Canola	cytosol	43.87	52.31
CDY04736	Canola	cytosol	43.87	52.31
Bra024572.1-P	Field mustard	cytosol	43.87	52.31
CDY25775	Canola	cytosol	45.16	51.09
CDY12479	Canola	cytosol	45.16	51.09
GSMUA_Achr9P27210_001	Banana	nucleus	49.68	50.66
Zm00001d050905_P001	Maize	cytosol	57.42	45.88
Zm00001d003400_P001	Maize	cytosol	51.61	44.44
Zm00001d043386_P001	Maize	cytosol	22.58	37.63
Zm00001d008330_P001	Maize	mitochondrion	27.1	34.43
Zm00001d016977_P002	Maize	cytosol	56.77	33.21
Zm00001d040291_P001	Maize	cytosol, mitochondrion	27.1	32.81
Zm00001d009402_P001	Maize	cytosol, mitochondrion	36.13	31.11
Zm00001d016016_P001	Maize	cytosol	23.23	30.0

Protein Annotations

EntrezGene:100285283	Gene3D:3.30.740.10	MapMan:35.2	ProteinID:AQK55122.1	UniProt:B6U2S1	InterPro:DLC_sf
InterPro:Dynein_light_chain_typ-1/2	EMBL:EU971536	EMBL:EU972478	GO:GO:0003674	GO:GO:0003774	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005856	GO:GO:0005874
GO:GO:0007017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	GO:GO:0030286	InterPro:IPR037177
PFAM:PF01221	PANTHER:PTHR11886	PANTHER:PTHR11886:SF39	SMART:SM01375	SUPFAM:SSF54648	UniParc:UPI000182F555
EnsemblPlantsGene:Zm00001d051789	EnsemblPlants:Zm00001d051789_P002	EnsemblPlants:Zm00001d051789_T002	SEG:seg	:	:

Description

Microtubule motor%3B Putative dynein light chain type 1 family protein

Coordinates

chr4:+:169867513..169874521

Molecular Weight (calculated)

17054.3 Da

IEP (calculated)

9.174

GRAVY (calculated)

-0.334

Length

155 amino acids

Sequence
(BLAST)

001: MREQQDSGDV TGRRGGVIRS LLGVERRLAE GDADAEGALG ASSEKQHLAA DSGEERKAVV RVVAADMPPA LQRRAFRCAR DELAAMPHFP RRLEPKRLAL
101: ALKKEFDTAY GPAWHCIVGT SFGSYVTHAR GGFLYFSVDK VYILLFRTAV EPSNH

Best Arabidopsis Sequence Match ( AT5G20110.1 )
(BLAST)

001: MNEERPKKSK KKSLMNFYKF SITSSKHSLI NPKSKPKIPI STPSISQQEV EEKPIVQSNK SHQNHVMRDI FELETTCSRN NERKKGGGAA EEGRKSVSHV
101: ERDTAARIEA AAEMLTVRIL AADMPGFMQA HAFRCARMTL DSLEKFSSKH MAFNLKKEFD KGYGPAWHCI VGSSFGSFVT HSTGCFIYFS MDKLYVLLFK
201: TKVRPASPH

Arabidopsis Description

At5g20110 [Source:UniProtKB/TrEMBL;Acc:Q6NM36]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.