Factsheet for Zm00001d016977_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d050905_P001	Maize	cytosol	66.04	90.21
EES07042	Sorghum	cytosol, mitochondrion	61.89	81.19
VIT_01s0011g05480.t01	Wine grape	cytosol	32.83	68.5
Zm00001d003400_P001	Maize	cytosol	46.04	67.78
Os02t0580400-01	Rice	cytosol	49.43	65.83
KRH70126	Soybean	cytosol	32.83	65.41
KRH08469	Soybean	cytosol	32.08	65.38
KRH60372	Soybean	cytosol	32.45	64.66
KRH41675	Soybean	cytosol	32.45	64.66
PGSC0003DMT400081918	Potato	cytosol	31.7	64.62
Bra012367.1-P	Field mustard	cytosol	30.94	63.08
Solyc01g005460.2.1	Tomato	cytosol	30.94	63.08
AT1G23220.1	Thale cress	cytosol	30.57	62.79
CDX91705	Canola	cytosol	30.57	62.31
CDY41457	Canola	cytosol	30.57	62.31
GSMUA_Achr7P12500_001	Banana	cytosol	33.96	62.07
GSMUA_Achr1P20660_001	Banana	cytosol	31.32	61.03
CDY21425	Canola	cytosol	29.81	60.77
CDY04736	Canola	cytosol	29.81	60.77
Bra024572.1-P	Field mustard	cytosol	29.81	60.77
CDY25775	Canola	cytosol	30.94	59.85
CDY12479	Canola	cytosol	30.94	59.85
GSMUA_Achr9P27210_001	Banana	nucleus	32.83	57.24
TraesCS6D01G189000.1	Wheat	cytosol	44.91	57.21
Zm00001d051789_P002	Maize	cytosol	33.21	56.77
Zm00001d017947_P001	Maize	cytosol, mitochondrion	32.45	55.84
TraesCS6B01G224400.1	Wheat	cytosol	43.4	55.56
Zm00001d043386_P001	Maize	cytosol	13.58	38.71
Zm00001d008330_P001	Maize	mitochondrion	14.72	31.97
Zm00001d016016_P001	Maize	cytosol	13.96	30.83
Zm00001d009402_P001	Maize	cytosol, mitochondrion	20.75	30.56
Zm00001d040291_P001	Maize	cytosol, mitochondrion	14.72	30.47

Protein Annotations

EntrezGene:100284593	Gene3D:3.30.740.10	MapMan:35.2	UniProt:A0A1D6HBJ2	ProteinID:AQK72071.1	InterPro:DLC_sf
InterPro:Dynein_light_chain_typ-1/2	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0007017
GO:GO:0008150	GO:GO:0009987	GO:GO:0030286	InterPro:IPR037177	PFAM:PF01221	PANTHER:PTHR11886
PANTHER:PTHR11886:SF61	SMART:SM01375	SUPFAM:SSF54648	UniParc:UPI000845767D	EnsemblPlantsGene:Zm00001d016977	EnsemblPlants:Zm00001d016977_P002
EnsemblPlants:Zm00001d016977_T002	SEG:seg	:	:	:	:

Description

Dynein light chain type 1 family protein

Coordinates

chr5:-:181789281..181792885

Molecular Weight (calculated)

29138.0 Da

IEP (calculated)

9.889

GRAVY (calculated)

-0.682

Length

265 amino acids

Sequence
(BLAST)

001: MQVPCPQWSV PTGPPPPPSP PLESKQGAQC DPVLRGRPIG PGRHACPLPQ VRRPAAVRDA PRRKRASAMD PVSEELERRS RYLNSLIRRT KLSATPAPPP
101: QPEPEPEHEV APQNPEPEPE TAVGKREEAK ADPVVVEEEK REAKVAGDGK GKEIKGKDDG GPKEDNSRKV SVRVRAADMP LPLQRRAVRL AYEAIVAMPR
201: LDSKRLALAL KKEFDTAYGP AWHCIVGTSF GSYVTHSLGG FLYFSVDKAY ILLFRTAVEP LAHPR

Best Arabidopsis Sequence Match ( AT1G23220.1 )
(BLAST)

001: MEGVELELER RSKFLNSLIQ KKKAKEQQDQ KDEFNVRVRA SDMPLPQQNR AFSLSREILN ATPGKADNKR LAHALKKDFD SAYGPAWHCI VGTSFGSYVT
101: HSTGGFLYFQ IDKVYVLLFK TAVEPLDQK

Arabidopsis Description

Dynein light chain type 1 family protein [Source:UniProtKB/TrEMBL;Acc:Q9LR39]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.