Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G224400.1 | Wheat | cytosol | 95.67 | 96.14 |
| VIT_01s0011g05480.t01 | Wine grape | cytosol | 41.83 | 68.5 |
| PGSC0003DMT400081918 | Potato | cytosol | 40.38 | 64.62 |
| Os02t0580400-01 | Rice | cytosol | 61.54 | 64.32 |
| GSMUA_Achr1P20660_001 | Banana | cytosol | 41.35 | 63.24 |
| KRH60372 | Soybean | cytosol | 40.38 | 63.16 |
| KRH41675 | Soybean | cytosol | 40.38 | 63.16 |
| Solyc01g005460.2.1 | Tomato | cytosol | 39.42 | 63.08 |
| KRH08469 | Soybean | cytosol | 39.42 | 63.08 |
| KRH70126 | Soybean | cytosol | 39.9 | 62.41 |
| TraesCS2D01G325700.1 | Wheat | cytosol | 50.96 | 61.63 |
| CDY41457 | Canola | cytosol | 38.46 | 61.54 |
| EES07042 | Sorghum | cytosol, mitochondrion | 59.13 | 60.89 |
| Bra012367.1-P | Field mustard | cytosol | 37.98 | 60.77 |
| CDX91705 | Canola | cytosol | 37.98 | 60.77 |
| AT1G23220.1 | Thale cress | cytosol | 37.5 | 60.47 |
| CDY21425 | Canola | cytosol | 37.5 | 60.0 |
| CDY04736 | Canola | cytosol | 37.5 | 60.0 |
| Bra024572.1-P | Field mustard | cytosol | 37.5 | 60.0 |
| Zm00001d050905_P001 | Maize | cytosol | 55.77 | 59.79 |
| TraesCS6D01G275800.1 | Wheat | cytosol | 39.9 | 58.45 |
| CDY25775 | Canola | cytosol | 37.98 | 57.66 |
| CDY12479 | Canola | cytosol | 37.98 | 57.66 |
| GSMUA_Achr7P12500_001 | Banana | cytosol | 39.9 | 57.24 |
| GSMUA_Achr9P27210_001 | Banana | nucleus | 39.9 | 54.61 |
| Zm00001d016977_P002 | Maize | cytosol | 57.21 | 44.91 |
| TraesCS3D01G296300.1 | Wheat | cytosol | 17.79 | 37.37 |
| TraesCS1D01G203800.1 | Wheat | cytosol | 17.31 | 36.36 |
| TraesCS7D01G056400.1 | Wheat | cytosol | 16.83 | 33.33 |
| TraesCS3D01G180700.1 | Wheat | cytosol | 17.79 | 26.24 |
Protein Annotations
| Gene3D:3.30.740.10 | MapMan:35.2 | InterPro:DLC_sf | InterPro:Dynein_light_chain_typ-1/2 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005856 | GO:GO:0007017 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0030286 |
| InterPro:IPR037177 | PFAM:PF01221 | PANTHER:PTHR11886 | PANTHER:PTHR11886:SF53 | SMART:SM01375 | SUPFAM:SSF54648 |
| EnsemblPlantsGene:TraesCS6D01G189000 | EnsemblPlants:TraesCS6D01G189000.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr6D:-:261008988..261011722
Molecular Weight (calculated)
23182.9 Da
IEP (calculated)
10.217
GRAVY (calculated)
-0.584
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPASEELER RSHYLSSLIR RTKLNAPPAP PPPTSHPEPE TKLELERERS PIRRTKLKLN AAPALPPSTT HPETGKLERE PGPKSQNLVE AKVVVEDREV
101: KEGDGKGKEE RKVSVRVRAA DMPVVLQRRA IRLAYDAVSA TPRADGKRLA LALKKEFDTS YGPAWHCIVG TSFGSYVTHT LGGFLYFSVD KVHILLFRTA
201: VEPLGHLR
101: KEGDGKGKEE RKVSVRVRAA DMPVVLQRRA IRLAYDAVSA TPRADGKRLA LALKKEFDTS YGPAWHCIVG TSFGSYVTHT LGGFLYFSVD KVHILLFRTA
201: VEPLGHLR
001: MEGVELELER RSKFLNSLIQ KKKAKEQQDQ KDEFNVRVRA SDMPLPQQNR AFSLSREILN ATPGKADNKR LAHALKKDFD SAYGPAWHCI VGTSFGSYVT
101: HSTGGFLYFQ IDKVYVLLFK TAVEPLDQK
101: HSTGGFLYFQ IDKVYVLLFK TAVEPLDQK
Arabidopsis Description
Dynein light chain type 1 family protein [Source:UniProtKB/TrEMBL;Acc:Q9LR39]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.