Factsheet for TraesCS6A01G295200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G325300.1	Wheat	cytosol	95.95	95.95
TraesCS6D01G275800.1	Wheat	cytosol	91.89	95.77
Zm00001d017947_P001	Maize	cytosol, mitochondrion	81.76	78.57
Zm00001d051789_P002	Maize	cytosol	81.76	78.06
EES05573	Sorghum	cytosol	81.76	76.58
Os02t0733001-00	Rice	cytosol, mitochondrion, peroxisome	81.08	75.0
VIT_01s0011g05480.t01	Wine grape	cytosol	53.38	62.2
GSMUA_Achr1P20660_001	Banana	cytosol	54.05	58.82
KRH70126	Soybean	cytosol	52.7	58.65
KRH08469	Soybean	cytosol	51.35	58.46
KRH41675	Soybean	cytosol	50.68	56.39
KRH60372	Soybean	cytosol	50.68	56.39
PGSC0003DMT400081918	Potato	cytosol	49.32	56.15
Solyc01g005460.2.1	Tomato	cytosol	48.65	55.38
CDY41457	Canola	cytosol	47.97	54.62
Bra012367.1-P	Field mustard	cytosol	47.97	54.62
CDX91705	Canola	cytosol	47.97	54.62
AT1G23220.1	Thale cress	cytosol	47.3	54.26
GSMUA_Achr7P12500_001	Banana	cytosol	52.7	53.79
CDY21425	Canola	cytosol	46.62	53.08
Bra024572.1-P	Field mustard	cytosol	46.62	53.08
CDY04736	Canola	cytosol	46.62	53.08
CDY25775	Canola	cytosol	47.97	51.82
CDY12479	Canola	cytosol	47.97	51.82
GSMUA_Achr9P27210_001	Banana	nucleus	52.7	51.32
TraesCS2A01G337200.1	Wheat	cytosol	58.11	49.14
TraesCS3A01G305600.1	Wheat	cytosol	22.97	34.34
TraesCS7A01G061500.1	Wheat	cytosol	23.65	33.33
TraesCS4A01G427300.1	Wheat	cytosol	22.97	32.38
TraesCS7A01G284100.1	Wheat	cytosol, plastid	18.92	32.18
TraesCS2A01G245600.1	Wheat	cytosol	20.95	31.31
TraesCS3A01G175300.1	Wheat	cytosol	26.35	27.66
TraesCS4A01G428300.1	Wheat	cytosol	22.97	25.37

Protein Annotations

Gene3D:3.30.740.10	MapMan:35.2	InterPro:DLC_sf	InterPro:Dynein_light_chain_typ-1/2	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005856	GO:GO:0007017	GO:GO:0008150	GO:GO:0009987	GO:GO:0030286
InterPro:IPR037177	PFAM:PF01221	PANTHER:PTHR11886	PANTHER:PTHR11886:SF39	SMART:SM01375	SUPFAM:SSF54648
EnsemblPlantsGene:TraesCS6A01G295200	EnsemblPlants:TraesCS6A01G295200.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6A:-:529001037..529002408

Molecular Weight (calculated)

16166.4 Da

IEP (calculated)

9.549

GRAVY (calculated)

-0.266

Length

148 amino acids

Sequence
(BLAST)

001: MREQEARVEA GRRGGVIRSL LGVARLAEDG GAGADEGDSK KEDGVGAERK AVVRVVAADM PPALQRRAFR CAREELAGMP HFPRRLEPKR LALALKKEFD
101: TAYGAAWHCI VGTSFGSYVT HANGGFLYFS VDKVYILLFR TAVEPPPH

Best Arabidopsis Sequence Match ( AT5G20110.1 )
(BLAST)

001: MNEERPKKSK KKSLMNFYKF SITSSKHSLI NPKSKPKIPI STPSISQQEV EEKPIVQSNK SHQNHVMRDI FELETTCSRN NERKKGGGAA EEGRKSVSHV
101: ERDTAARIEA AAEMLTVRIL AADMPGFMQA HAFRCARMTL DSLEKFSSKH MAFNLKKEFD KGYGPAWHCI VGSSFGSFVT HSTGCFIYFS MDKLYVLLFK
201: TKVRPASPH

Arabidopsis Description

At5g20110 [Source:UniProtKB/TrEMBL;Acc:Q6NM36]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.