CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH12076	Soybean	cytosol	94.92	91.8
KRH12077	Soybean	cytosol	92.37	78.42
GSMUA_Achr11P...	Banana	cytosol	50.0	76.62
GSMUA_Achr8P30040_001	Banana	cytosol	49.15	75.32
Solyc01g066590.2.1	Tomato	cytosol, extracellular	74.58	73.95
PGSC0003DMT400029467	Potato	extracellular	74.58	73.95
KRH37077	Soybean	mitochondrion	94.92	71.34
VIT_05s0077g02110.t01	Wine grape	cytosol	70.34	70.94
Zm00001d008330_P001	Maize	mitochondrion	62.71	60.66
EES00507	Sorghum	cytosol	65.25	59.23
Os01t0256400-01	Rice	cytosol, nucleus	65.25	59.23
Zm00001d040291_P001	Maize	cytosol, mitochondrion	63.56	58.59
TraesCS3D01G180700.1	Wheat	cytosol	64.41	53.9
TraesCS3B01G205000.1	Wheat	cytosol	64.41	53.9
TraesCS3A01G175300.1	Wheat	cytosol	64.41	53.9
KRH40947	Soybean	cytosol	22.88	52.94
GSMUA_AchrUn_...	Banana	cytosol	31.36	41.57
KRH27167	Soybean	cytosol	33.05	41.49
KRH60274	Soybean	cytosol	31.36	39.78
KRH25852	Soybean	cytosol	19.49	38.98
KRH41561	Soybean	cytosol	30.51	38.71
OQU83188	Sorghum	plastid	40.68	38.1
KRH23441	Soybean	cytosol	29.66	36.84
KRH09878	Soybean	cytosol	29.66	36.84
KRH55664	Soybean	cytosol, mitochondrion, peroxisome	33.9	36.7
Os06t0492700-00	Rice	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	38.98	33.33
KRH70126	Soybean	cytosol	34.75	30.83
KRH08469	Soybean	cytosol	33.9	30.77
KRH41675	Soybean	cytosol	32.2	28.57
KRH60372	Soybean	cytosol	32.2	28.57
KRH49195	Soybean	cytosol	24.58	25.89
KRH27230	Soybean	cytosol	33.05	25.66
KRH22104	Soybean	cytosol, plastid	33.05	24.84
KRH33092	Soybean	plastid	22.88	18.12
KRH20287	Soybean	cytosol	37.29	18.03
KRH03712	Soybean	cytosol	37.29	17.96
KRH03396	Soybean	cytosol	35.59	16.22
KRH56986	Soybean	cytosol	35.59	15.91
KRH40946	Soybean	plastid	10.17	10.34

Protein Annotations

EntrezGene:100305908	Gene3D:3.30.740.10	MapMan:35.1	EMBL:ACUP02005413	EMBL:BT089739	UniProt:C6SX45
InterPro:DLC_sf	InterPro:Dynein_light_1/2_CS	InterPro:Dynein_light_chain_typ-1/2	EnsemblPlantsGene:GLYMA_09G043000	GO:GO:0003674	GO:GO:0003774
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005856	GO:GO:0005868	GO:GO:0005874	GO:GO:0005875	GO:GO:0006810
GO:GO:0007017	GO:GO:0008092	GO:GO:0008150	GO:GO:0008574	GO:GO:0009987	GO:GO:0010970
GO:GO:0016043	GO:GO:0016787	GO:GO:0030286	GO:GO:0045505	GO:GO:0051959	GO:GO:0060271
GO:GO:2000582	InterPro:IPR037177	EnsemblPlants:KRH37076	ProteinID:KRH37076	ProteinID:KRH37076.1	PFAM:PF01221
ScanProsite:PS01239	PANTHER:PTHR11886	SMART:SM01375	SUPFAM:SSF54648	UniParc:UPI0001B151F1	SEG:seg

Description

hypothetical protein

Coordinates

chr9:-:3674438..3677910

Molecular Weight (calculated)

13263.9 Da

IEP (calculated)

8.456

GRAVY (calculated)

-0.463

Length

118 amino acids

Sequence
(BLAST)

001: MSEEAKKNFA GALTARPNSD EPKPAPVPAV PPKKVIIKSA DMIPDMQKEA VDIAVAAFEK YNVEKDVAEQ IKKEFDKRHG PTWHCIVGRN FGSYVTHETN
101: HFVYFYLDQK AVLLFKSG

Best Arabidopsis Sequence Match ( AT4G15930.1 )
(BLAST)

001: MSDGRRKKSV NGGAPAQTIL DDRRSSLPEV EASPPAGKRA VIKSADMKDD MQKEAIEIAI SAFEKYSVEK DIAENIKKEF DKKHGATWHC IVGRNFGSYV
101: THETNHFVYF YLDQKAVLLF KSG

Arabidopsis Description

At4g15930 [Source:UniProtKB/TrEMBL;Acc:Q84VW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.