Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- endoplasmic reticulum 1
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
VIT_19s0090g01710.t01 | Wine grape | cytosol | 28.86 | 31.73 |
VIT_19s0014g00030.t01 | Wine grape | cytosol, golgi, nucleus | 21.81 | 22.34 |
VIT_19s0090g01700.t01 | Wine grape | cytosol | 22.82 | 17.66 |
VIT_07s0129g00610.t01 | Wine grape | cytosol | 28.86 | 14.9 |
VIT_07s0151g00650.t01 | Wine grape | endoplasmic reticulum, extracellular | 26.51 | 14.03 |
VIT_05s0020g03470.t01 | Wine grape | nucleus | 21.81 | 12.45 |
VIT_11s0016g04070.t01 | Wine grape | nucleus | 20.13 | 11.26 |
VIT_14s0030g00690.t01 | Wine grape | extracellular, golgi | 10.07 | 6.86 |
VIT_19s0014g00060.t01 | Wine grape | nucleus | 2.35 | 2.21 |
Protein Annotations
MapMan:35.1 | ProteinID:CBI15712 | ProteinID:CBI15712.3 | UniProt:D7SH32 | EMBL:FN594950 | InterPro:Frigida |
GO:GO:0000003 | GO:GO:0005575 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009791 | GO:GO:0009908 |
GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0030154 | PFAM:PF07899 | PANTHER:PTHR31791 |
PANTHER:PTHR31791:SF13 | TMHMM:TMhelix | UniParc:UPI0001BE0F63 | ArrayExpress:VIT_17s0000g00850 | EnsemblPlantsGene:VIT_17s0000g00850 | EnsemblPlants:VIT_17s0000g00850.t01 |
SEG:seg | : | : | : | : | : |
Description
FRIGIDA-like protein [Source:UniProtKB/TrEMBL;Acc:D7SH32]
Coordinates
chr17:-:566448..567526
Molecular Weight (calculated)
33525.9 Da
IEP (calculated)
7.933
GRAVY (calculated)
-0.020
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSVENSSTD PNLFLTNRLG DIRAYSYSLA SFTLQWRDLE ELFESIQLSV DDCFNDIQLR QKQITEALSS SVPSQPRPEL KYLCLNMDGK GLRSFLIEKT
101: KARPPFSIGD EVSAALLSAP DPAMLVLDAV DGFYPRKSKS KGKDKRSELV DIRRTCVLLL EQLMKISPRI GPAVTAKAKK LAIEWKAKIN GENDNSSRVL
201: GLLLLLAAYE LGCVFQLNVL FDLFEMVPLH HQASELYRRL GLMDRVSGKL GHIGHRYSAR TTKFGLVLYT VLCPGCTFCL HAPFVMYECF ICESQVEF
101: KARPPFSIGD EVSAALLSAP DPAMLVLDAV DGFYPRKSKS KGKDKRSELV DIRRTCVLLL EQLMKISPRI GPAVTAKAKK LAIEWKAKIN GENDNSSRVL
201: GLLLLLAAYE LGCVFQLNVL FDLFEMVPLH HQASELYRRL GLMDRVSGKL GHIGHRYSAR TTKFGLVLYT VLCPGCTFCL HAPFVMYECF ICESQVEF
001: MTAAESIAAS INQIDEKKQK LKKAFDDLQA HRSLLSPSFN LSWSEIDSHF SSLQSSLFNR LQSAVTSSNS GNIETPTAVT TETPVLWPEL RKFCEKNDGK
101: GLGNYMIENS RKRLSINEEL PNAIRCSENP APLVLDAIEG SYHCSSPSSS SSARAIDVKR IFVLLLEALI EINANLTNDL RERARTIAYD WKPNIGNKPS
201: EALGFLHLVA AFELGSLFST EEICDYIFLI SKYKQATTIC KKIGLDRNRI GVLVQKFLDT GRLLVAIRFI YENEMVGEFE PVSILKTSLK NSREAAKRVC
301: AEGNYSLKVQ NEATDKELSA LRAVIKVVKE KNIESEFMEE KLEECVKELE DQKAQRKRAT KFNSPANPQQ PQEQKVDNKR PRVANGSSME YNLTIPPLRP
401: QQQPPLLPTP SQILQVNPYG LLSSILPGVA VPYGNPRALF GSVPAPASRP VFYVQQTGYG MPPPQYRPPY YPQ
101: GLGNYMIENS RKRLSINEEL PNAIRCSENP APLVLDAIEG SYHCSSPSSS SSARAIDVKR IFVLLLEALI EINANLTNDL RERARTIAYD WKPNIGNKPS
201: EALGFLHLVA AFELGSLFST EEICDYIFLI SKYKQATTIC KKIGLDRNRI GVLVQKFLDT GRLLVAIRFI YENEMVGEFE PVSILKTSLK NSREAAKRVC
301: AEGNYSLKVQ NEATDKELSA LRAVIKVVKE KNIESEFMEE KLEECVKELE DQKAQRKRAT KFNSPANPQQ PQEQKVDNKR PRVANGSSME YNLTIPPLRP
401: QQQPPLLPTP SQILQVNPYG LLSSILPGVA VPYGNPRALF GSVPAPASRP VFYVQQTGYG MPPPQYRPPY YPQ
Arabidopsis Description
FRL2Inactive FRIGIDA-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.