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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 2
  • endoplasmic reticulum 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_19s0090g01710.t01 Wine grape cytosol 28.86 31.73
VIT_19s0014g00030.t01 Wine grape cytosol, golgi, nucleus 21.81 22.34
VIT_19s0090g01700.t01 Wine grape cytosol 22.82 17.66
VIT_07s0129g00610.t01 Wine grape cytosol 28.86 14.9
VIT_07s0151g00650.t01 Wine grape endoplasmic reticulum, extracellular 26.51 14.03
VIT_05s0020g03470.t01 Wine grape nucleus 21.81 12.45
VIT_11s0016g04070.t01 Wine grape nucleus 20.13 11.26
VIT_14s0030g00690.t01 Wine grape extracellular, golgi 10.07 6.86
VIT_19s0014g00060.t01 Wine grape nucleus 2.35 2.21
Protein Annotations
MapMan:35.1ProteinID:CBI15712ProteinID:CBI15712.3UniProt:D7SH32EMBL:FN594950InterPro:Frigida
GO:GO:0000003GO:GO:0005575GO:GO:0007275GO:GO:0008150GO:GO:0009791GO:GO:0009908
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0030154PFAM:PF07899PANTHER:PTHR31791
PANTHER:PTHR31791:SF13TMHMM:TMhelixUniParc:UPI0001BE0F63ArrayExpress:VIT_17s0000g00850EnsemblPlantsGene:VIT_17s0000g00850EnsemblPlants:VIT_17s0000g00850.t01
SEG:seg:::::
Description
FRIGIDA-like protein [Source:UniProtKB/TrEMBL;Acc:D7SH32]
Coordinates
chr17:-:566448..567526
Molecular Weight (calculated)
33525.9 Da
IEP (calculated)
7.933
GRAVY (calculated)
-0.020
Length
298 amino acids
Sequence
(BLAST)
001: MVSVENSSTD PNLFLTNRLG DIRAYSYSLA SFTLQWRDLE ELFESIQLSV DDCFNDIQLR QKQITEALSS SVPSQPRPEL KYLCLNMDGK GLRSFLIEKT
101: KARPPFSIGD EVSAALLSAP DPAMLVLDAV DGFYPRKSKS KGKDKRSELV DIRRTCVLLL EQLMKISPRI GPAVTAKAKK LAIEWKAKIN GENDNSSRVL
201: GLLLLLAAYE LGCVFQLNVL FDLFEMVPLH HQASELYRRL GLMDRVSGKL GHIGHRYSAR TTKFGLVLYT VLCPGCTFCL HAPFVMYECF ICESQVEF
Best Arabidopsis Sequence Match ( AT1G31814.1 )
(BLAST)
001: MTAAESIAAS INQIDEKKQK LKKAFDDLQA HRSLLSPSFN LSWSEIDSHF SSLQSSLFNR LQSAVTSSNS GNIETPTAVT TETPVLWPEL RKFCEKNDGK
101: GLGNYMIENS RKRLSINEEL PNAIRCSENP APLVLDAIEG SYHCSSPSSS SSARAIDVKR IFVLLLEALI EINANLTNDL RERARTIAYD WKPNIGNKPS
201: EALGFLHLVA AFELGSLFST EEICDYIFLI SKYKQATTIC KKIGLDRNRI GVLVQKFLDT GRLLVAIRFI YENEMVGEFE PVSILKTSLK NSREAAKRVC
301: AEGNYSLKVQ NEATDKELSA LRAVIKVVKE KNIESEFMEE KLEECVKELE DQKAQRKRAT KFNSPANPQQ PQEQKVDNKR PRVANGSSME YNLTIPPLRP
401: QQQPPLLPTP SQILQVNPYG LLSSILPGVA VPYGNPRALF GSVPAPASRP VFYVQQTGYG MPPPQYRPPY YPQ
Arabidopsis Description
FRL2Inactive FRIGIDA-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.