Factsheet for Zm00001d049364_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
nucleus 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES14715	Sorghum	nucleus	74.88	69.72
OQU80085	Sorghum	plastid	75.86	66.96
Zm00001d024324_P001	Maize	nucleus	53.2	58.06
Zm00001d026271_P001	Maize	nucleus, plastid	51.72	47.3
Zm00001d002364_P001	Maize	nucleus, plastid	48.77	44.59
GSMUA_Achr8P33590_001	Banana	nucleus	39.9	43.32
Bra030095.1-P	Field mustard	nucleus	35.47	42.86
CDY15673	Canola	nucleus	35.47	42.86
CDY70175	Canola	nucleus	35.47	42.86
Zm00001d026563_P001	Maize	nucleus	37.44	42.7
KRH26242	Soybean	nucleus	27.09	42.64
Zm00001d001907_P001	Maize	nucleus, plastid	36.95	42.61
Bra010880.1-P	Field mustard	nucleus	35.47	41.86
CDX90146	Canola	nucleus	35.47	41.86
CDY69368	Canola	nucleus	34.98	41.28
Bra032900.1-P	Field mustard	nucleus	31.53	40.51
KRH55195	Soybean	nucleus	36.45	40.44
CDY70796	Canola	nucleus	32.02	40.37
CDY34105	Canola	nucleus	31.03	39.87
Bra032901.1-P	Field mustard	nucleus	31.53	39.51
CDY34104	Canola	nucleus	31.53	39.51
VIT_19s0014g02240.t01	Wine grape	nucleus	39.41	36.36
Zm00001d038585_P001	Maize	mitochondrion, nucleus	37.93	35.0
Zm00001d000339_P001	Maize	nucleus	39.9	34.76
Zm00001d053707_P001	Maize	nucleus	35.47	34.62
Zm00001d012584_P001	Maize	nucleus	28.08	34.55
KRH27281	Soybean	nucleus	32.51	34.2
Zm00001d015639_P001	Maize	nucleus	35.47	34.12
KRH22040	Soybean	nucleus	32.02	33.68
Zm00001d036536_P001	Maize	nucleus	32.51	33.5
AT1G28370.2	Thale cress	mitochondrion, nucleus, plastid	33.0	32.84
Zm00001d014565_P001	Maize	nucleus	31.03	32.64
Zm00001d043205_P001	Maize	nucleus	37.93	32.49
Zm00001d012585_P001	Maize	nucleus	38.42	32.37
Zm00001d053859_P001	Maize	nucleus	30.54	31.63
CDY61906	Canola	cytosol	20.69	31.11
Zm00001d043204_P001	Maize	nucleus	28.08	30.65
Zm00001d038584_P001	Maize	nucleus	27.09	26.19
Zm00001d010676_P001	Maize	nucleus	26.11	25.85
Zm00001d024436_P001	Maize	nucleus	23.65	25.81
Zm00001d025298_P001	Maize	plastid	27.59	20.59
Zm00001d003871_P001	Maize	plastid	26.6	19.93
Zm00001d050948_P001	Maize	nucleus	27.59	19.05
Zm00001d016623_P001	Maize	nucleus	23.65	18.11
Zm00001d007119_P001	Maize	nucleus	24.63	16.89
Zm00001d022488_P001	Maize	nucleus	25.62	16.51

Protein Annotations

EntrezGene:100304148	Gene3D:3.30.730.10	MapMan:35.1	ProteinID:AIB05197.1	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	ProteinID:AQK50123.1	UniProt:B6TYT8	InterPro:DNA-bd_dom_sf	EMBL:EU970153	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847
PIRSF:PIRSF038123	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31677	PANTHER:PTHR31677:SF17	SMART:SM00380
SUPFAM:SSF54171	UniParc:UPI000182F900	EnsemblPlantsGene:Zm00001d049364	EnsemblPlants:Zm00001d049364_P001	EnsemblPlants:Zm00001d049364_T001	SEG:seg

Description

AP2-EREBP-transcription factor 209Ethylene-responsive transcription factor 4%3B Putative AP2/EREBP transcription factor superfamily protein

Coordinates

chr4:+:27940728..27941339

Molecular Weight (calculated)

20754.4 Da

IEP (calculated)

7.351

GRAVY (calculated)

-0.052

Length

203 amino acids

Sequence
(BLAST)

001: MAPKRPVSAA AAAEQPRLRG VRKRPWGRYA AEIRDPVRKA RVWLGTFDTP EQAARAYDAA ARKLRGPGAA TNYPAPEPTA EALAEAPAAS GSGSAVVYES
101: SSASASASSC SLPLAAPSLD LSLALPAAAA AAEPYQLFAD PAAAAAVTPA LLHFLPPKSE EQQSYSGSSS LSSSSSSVVF DAAPPVGLRL DLNLALPPAE
201: MVM

Best Arabidopsis Sequence Match ( AT3G20310.1 )
(BLAST)

001: MRKGRGSSVV GPALPVTAGG SVKEPRYRGV RKRPWGRFAA EIRDPLKKSR VWLGTFDSAV DAARAYDTAA RNLRGPKAKT NFPIDCSPSS PLQPLTYLHN
101: QNLCSPPVIQ NQIDPFMDHR LYGGGNFQEQ QQQQIISRPA SSSMSSTVKS CSGPRPMEAA AASSSVAKPL HAIKRYPRTP PVAPEDCHSD CDSSSSVIDD
201: GDDIASSSSR RKTPFQFDLN FPPLDGVDLF AGGIDDLHCT DLRL

Arabidopsis Description

ERF7Ethylene-responsive transcription factor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDE4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.