Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH26242 | Soybean | nucleus | 39.09 | 66.67 |
| KRH55195 | Soybean | nucleus | 54.09 | 65.03 |
| Bra030095.1-P | Field mustard | nucleus | 44.55 | 58.33 |
| Bra010880.1-P | Field mustard | nucleus | 45.45 | 58.14 |
| CDX90146 | Canola | nucleus | 45.45 | 58.14 |
| KRH27281 | Soybean | nucleus | 50.91 | 58.03 |
| CDY15673 | Canola | nucleus | 44.09 | 57.74 |
| CDY70175 | Canola | nucleus | 44.09 | 57.74 |
| CDY69368 | Canola | nucleus | 45.0 | 57.56 |
| KRH22040 | Soybean | nucleus | 50.45 | 57.51 |
| CDY70796 | Canola | nucleus | 40.0 | 54.66 |
| CDY34104 | Canola | nucleus | 39.55 | 53.7 |
| Bra032901.1-P | Field mustard | nucleus | 39.55 | 53.7 |
| VIT_10s0003g00140.t01 | Wine grape | nucleus | 55.0 | 53.3 |
| Bra032900.1-P | Field mustard | nucleus | 38.18 | 53.16 |
| CDY34105 | Canola | nucleus | 37.27 | 51.9 |
| GSMUA_Achr8P06870_001 | Banana | nucleus | 43.64 | 51.89 |
| GSMUA_Achr7P03640_001 | Banana | nucleus | 38.64 | 51.2 |
| VIT_12s0028g03270.t01 | Wine grape | nucleus | 46.82 | 48.82 |
| GSMUA_Achr8P33590_001 | Banana | nucleus | 41.36 | 48.66 |
| CDY61906 | Canola | cytosol | 29.09 | 47.41 |
| AT1G28370.2 | Thale cress | mitochondrion, nucleus, plastid | 43.18 | 46.57 |
| GSMUA_Achr1P25890_001 | Banana | nucleus | 33.64 | 46.54 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.82 | 45.76 |
| GSMUA_Achr5P26850_001 | Banana | nucleus | 38.64 | 44.5 |
| GSMUA_Achr3P23710_001 | Banana | nucleus | 39.55 | 43.07 |
| TraesCS2A01G427700.1 | Wheat | nucleus | 40.45 | 42.38 |
| VIT_10s0003g00130.t01 | Wine grape | nucleus | 29.09 | 42.11 |
| TraesCS2D01G425700.1 | Wheat | nucleus | 40.45 | 41.01 |
| Zm00001d026271_P001 | Maize | nucleus, plastid | 41.36 | 40.99 |
| TraesCS2B01G448100.1 | Wheat | nucleus | 40.45 | 40.64 |
| Zm00001d002364_P001 | Maize | nucleus, plastid | 40.91 | 40.54 |
| Zm00001d024324_P001 | Maize | nucleus | 33.64 | 39.78 |
| Zm00001d049364_P001 | Maize | nucleus, plastid | 36.36 | 39.41 |
| Os04t0610400-01 | Rice | nucleus | 39.09 | 38.74 |
| EES11400 | Sorghum | nucleus | 39.55 | 37.66 |
| VIT_07s0141g00690.t01 | Wine grape | nucleus | 28.64 | 37.5 |
| VIT_12s0059g01460.t01 | Wine grape | nucleus | 34.55 | 37.25 |
| EES14715 | Sorghum | nucleus | 36.36 | 36.7 |
| EES14716 | Sorghum | plastid | 35.0 | 36.67 |
| OQU80085 | Sorghum | plastid | 37.73 | 36.09 |
| EES14717 | Sorghum | nucleus | 35.0 | 35.98 |
| VIT_14s0081g00520.t01 | Wine grape | nucleus | 26.82 | 34.5 |
| HORVU2Hr1G099890.2 | Barley | nucleus | 31.82 | 32.26 |
| VIT_19s0090g01080.t01 | Wine grape | nucleus | 37.73 | 32.17 |
| VIT_14s0068g00860.t01 | Wine grape | nucleus | 25.91 | 21.92 |
| VIT_00s0291g00030.t01 | Wine grape | nucleus | 31.36 | 16.67 |
Protein Annotations
| EntrezGene:100243603 | wikigene:100243603 | MapMan:15.5.7.1 | Gene3D:3.30.730.10 | EMBL:AM426883 | InterPro:AP2/ERF-transcript_factor |
| InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ProteinID:CAN80071 | ProteinID:CAN80071.1 | ProteinID:CBI20263 | ProteinID:CBI20263.3 |
| InterPro:DNA-bd_dom_sf | UniProt:E0CSG4 | EMBL:FN595229 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | EntrezGene:LOC100243603 | wikigene:LOC100243603 | PFAM:PF00847 |
| PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31677 | PANTHER:PTHR31677:SF42 | SMART:SM00380 |
| SUPFAM:SSF54171 | TIGR:TC63214 | UniParc:UPI00001D8989 | ArrayExpress:VIT_19s0014g02240 | EnsemblPlantsGene:VIT_19s0014g02240 | EnsemblPlants:VIT_19s0014g02240.t01 |
| unigene:Vvi.11517 | RefSeq:XP_002285146 | RefSeq:XP_002285146.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr19:+:2368302..2369336
Molecular Weight (calculated)
23691.5 Da
IEP (calculated)
9.690
GRAVY (calculated)
-0.507
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPRDKPTGV TAGATGNKEI RYRGVRKRPW GRYAAEIRDP GKKSRVWLGT FDTAEEAARA YDAAAREFRG AKAKTNFPSP TDLAAAAATT ANRSPSQSST
101: VESSSREALS PGAIAGPPAL DLNLSHPAAA GQFSAVRYPA VGVFPIAQPL FFFEPFSRPE KPKTHRDMFD LDRAVADFHP AIAGSVHSDS DSSSVVDFNY
201: HDRSTRLLNL DLNHPPAEVA
101: VESSSREALS PGAIAGPPAL DLNLSHPAAA GQFSAVRYPA VGVFPIAQPL FFFEPFSRPE KPKTHRDMFD LDRAVADFHP AIAGSVHSDS DSSSVVDFNY
201: HDRSTRLLNL DLNHPPAEVA
001: MAKMGLKPDP ATTNQTHNNA KEIRYRGVRK RPWGRYAAEI RDPGKKTRVW LGTFDTAEEA ARAYDTAARD FRGAKAKTNF PTFLELSDQK VPTGFARSPS
101: QSSTLDCASP PTLVVPSATA GNVPPQLELS LGGGGGGSCY QIPMSRPVYF LDLMGIGNVG RGQPPPVTSA FRSPVVHVAT KMACGAQSDS DSSSVVDFEG
201: GMEKRSQLLD LDLNLPPPSE QA
101: QSSTLDCASP PTLVVPSATA GNVPPQLELS LGGGGGGSCY QIPMSRPVYF LDLMGIGNVG RGQPPPVTSA FRSPVVHVAT KMACGAQSDS DSSSVVDFEG
201: GMEKRSQLLD LDLNLPPPSE QA
Arabidopsis Description
ERF4Ethylene-responsive transcription factor 4 [Source:UniProtKB/Swiss-Prot;Acc:O80340]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.