CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 5
plastid 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES14715	Sorghum	nucleus	74.29	71.56
OQU80085	Sorghum	plastid	69.52	63.48
EES14717	Sorghum	nucleus	59.05	57.94
Bra030095.1-P	Field mustard	nucleus	34.76	43.45
CDY70175	Canola	nucleus	34.76	43.45
CDY15673	Canola	nucleus	34.76	43.45
GSMUA_Achr8P33590_001	Banana	nucleus	38.57	43.32
KRH26242	Soybean	nucleus	26.19	42.64
CDX90146	Canola	nucleus	34.29	41.86
Bra010880.1-P	Field mustard	nucleus	34.29	41.86
Bra032900.1-P	Field mustard	nucleus	31.43	41.77
CDY69368	Canola	nucleus	33.81	41.28
CDY34105	Canola	nucleus	30.95	41.14
CDY70796	Canola	nucleus	31.43	40.99
EES11400	Sorghum	nucleus	44.76	40.69
KRH55195	Soybean	nucleus	34.76	39.89
CDY34104	Canola	nucleus	30.48	39.51
Bra032901.1-P	Field mustard	nucleus	30.48	39.51
OQU82539	Sorghum	nucleus, plastid	33.81	37.37
KRH22040	Soybean	nucleus	33.81	36.79
KRH27281	Soybean	nucleus	32.86	35.75
VIT_19s0014g02240.t01	Wine grape	nucleus	36.67	35.0
EER88863	Sorghum	nucleus	31.9	34.36
CDY61906	Canola	cytosol	21.43	33.33
AT1G28370.2	Thale cress	mitochondrion, nucleus, plastid	31.9	32.84
EES01601	Sorghum	nucleus	27.62	32.77
EES06418	Sorghum	nucleus	31.43	30.84
EES19749	Sorghum	nucleus, plastid	37.14	30.35
OQU87713	Sorghum	nucleus, plastid	34.76	30.17
KXG24553	Sorghum	nucleus	21.43	26.16
KXG22269	Sorghum	nucleus	25.71	25.23
KXG30301	Sorghum	nucleus, plastid	22.38	17.03
EES05354	Sorghum	nucleus	24.76	16.77
EES10693	Sorghum	plastid	22.38	16.43
KXG36907	Sorghum	nucleus	23.81	15.29

Protein Annotations

Gene3D:3.30.730.10	MapMan:35.2	EntrezGene:8086050	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	UniProt:C5YIV8
InterPro:DNA-bd_dom_sf	EnsemblPlants:EES14716	ProteinID:EES14716	ProteinID:EES14716.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367
PFscan:PS51032	PANTHER:PTHR31677	SMART:SM00380	EnsemblPlantsGene:SORBI_3007G077200	SUPFAM:SSF54171	unigene:Sbi.565
UniParc:UPI0001A87E47	RefSeq:XP_002445221.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:8912961..8914779

Molecular Weight (calculated)

21983.0 Da

IEP (calculated)

10.277

GRAVY (calculated)

-0.256

Length

210 amino acids

Sequence
(BLAST)

001: MAPKRSTSLS SGSNSSSGGG VCPLAAAAEQ PRLRGVRKRP WGRYAAEIRD PVRKARVWLG TFDTPEQAAR AYDAAARRLR GPGATTNYPQ ASEPVPAASA
101: SGSGVVYEPS SSSSWSLPLP PQESVTVAVA ASLDLSLALP ADAAAAVKPY QLFMDPTAAL ALRQLLPPRS EEERRSRSAR WSSSSSSSAG QVVGLGLLDL
201: NLPPPVEMVM

Best Arabidopsis Sequence Match ( AT5G44210.1 )
(BLAST)

001: MAPRQANGRS IAVSEGGGGK TMTMTTMRKE VHFRGVRKRP WGRYAAEIRD PGKKTRVWLG TFDTAEEAAR AYDTAAREFR GSKAKTNFPL PGESTTVNDG
101: GENDSYVNRT TVTTAREMTR QRFPFACHRE RKVVGGYASA GFFFDPSRAA SLRAELSRVC PVRFDPVNIE LSIGIRETVK VEPRRELNLD LNLAPPVVDV

Arabidopsis Description

ERF9Ethylene-responsive transcription factor 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE67]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.