CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015639_P001	Maize	nucleus	91.59	92.89
Zm00001d053707_P001	Maize	nucleus	89.72	92.31
TraesCS6B01G199800.1	Wheat	nucleus	72.9	76.47
TraesCS6A01G171900.1	Wheat	nucleus	73.36	75.85
TraesCS6D01G161300.1	Wheat	nucleus	72.9	75.36
PGSC0003DMT400001820	Potato	nucleus	46.73	51.55
CDX82253	Canola	nucleus	50.47	50.23
Solyc07g049490.1.1	Tomato	nucleus	46.26	50.0
CDY36045	Canola	nucleus	50.47	49.77
Bra001784.1-P	Field mustard	nucleus	50.0	49.77
KRH73797	Soybean	nucleus	51.4	49.55
KRH14334	Soybean	nucleus	50.47	48.65
OQU82539	Sorghum	nucleus, plastid	42.99	48.42
Bra038261.1-P	Field mustard	nucleus	49.07	46.88
Solyc12g005960.1.1	Tomato	nucleus	41.59	46.11
PGSC0003DMT400036071	Potato	nucleus	40.65	45.79
Bra035792.1-P	Field mustard	mitochondrion, nucleus	47.66	45.33
EER88863	Sorghum	nucleus	41.12	45.13
AT3G20310.1	Thale cress	nucleus	49.07	43.03
VIT_19s0090g01080.t01	Wine grape	nucleus	50.0	41.47
EES01601	Sorghum	nucleus	29.44	35.59
EES11400	Sorghum	nucleus	37.85	35.06
EES14715	Sorghum	nucleus	32.71	32.11
EES14716	Sorghum	plastid	30.84	31.43
EES19749	Sorghum	nucleus, plastid	37.38	31.13
EES14717	Sorghum	nucleus	30.84	30.84
OQU87713	Sorghum	nucleus, plastid	34.11	30.17
OQU80085	Sorghum	plastid	32.24	30.0
KXG22269	Sorghum	nucleus	28.97	28.97
KXG24553	Sorghum	nucleus	21.03	26.16
EES05354	Sorghum	nucleus	29.44	20.32
KXG30301	Sorghum	nucleus, plastid	25.7	19.93
EES10693	Sorghum	plastid	26.17	19.58
KXG36907	Sorghum	nucleus	24.3	15.9

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	EntrezGene:8077658	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	UniProt:C5XX22
InterPro:DNA-bd_dom_sf	EnsemblPlants:EES06418	ProteinID:EES06418	ProteinID:EES06418.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367
PFscan:PS51032	PANTHER:PTHR31677	PANTHER:PTHR31677:SF13	SMART:SM00380	EnsemblPlantsGene:SORBI_3004G073100	SUPFAM:SSF54171
unigene:Sbi.16687	UniParc:UPI0001A85BAB	RefSeq:XP_002453442.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:-:5885616..5889607

Molecular Weight (calculated)

22109.0 Da

IEP (calculated)

7.372

GRAVY (calculated)

-0.305

Length

214 amino acids

Sequence
(BLAST)

001: MRRGGGVAAA AEADGDVESR FRGVRKRPWG RYAAEIRDPA KKARVWLGTF DSAEDAARAY DAAARMLRGP KARTNFPLPA AAAHHHLHMP AAAAAAAAPY
101: TTYPNATGVS TPPVARPACS SLSSTVESFG GARPRPVLPP RPLPPPIPDG DCRSDCGSSA SVVDDDCTDA AASPSCPVPL PFDLNLPPGG GGCGAGVGLY
201: ADEEDELRLT ALRL

Best Arabidopsis Sequence Match ( AT1G50640.1 )
(BLAST)

001: MRRGRGSSAV AGPTVVAAIN GSVKEIRFRG VRKRPWGRFA AEIRDPWKKA RVWLGTFDSA EEAARAYDSA ARNLRGPKAK TNFPIDSSSP PPPNLRFNQI
101: RNQNQNQVDP FMDHRLFTDH QQQFPIVNRP TSSSMSSTVE SFSGPRPTTM KPATTKRYPR TPPVVPEDCH SDCDSSSSVI DDDDDIASSS RRRNPPFQFD
201: LNFPPLDCVD LFNGADDLHC TDLRL

Arabidopsis Description

ERF3Uncharacterized protein At1g50640 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV01]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.