Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82253 | Canola | nucleus | 93.55 | 94.42 |
| Bra001784.1-P | Field mustard | nucleus | 93.55 | 94.42 |
| CDY22810 | Canola | nucleus | 71.43 | 76.35 |
| CDY37113 | Canola | mitochondrion, nucleus | 71.43 | 74.52 |
| KRH73797 | Soybean | nucleus | 59.45 | 58.11 |
| KRH14334 | Soybean | nucleus | 58.99 | 57.66 |
| PGSC0003DMT400001820 | Potato | nucleus | 50.69 | 56.7 |
| Solyc07g049490.1.1 | Tomato | nucleus | 50.69 | 55.56 |
| Zm00001d015639_P001 | Maize | nucleus | 49.77 | 51.18 |
| TraesCS6B01G199800.1 | Wheat | nucleus | 47.93 | 50.98 |
| TraesCS6A01G171900.1 | Wheat | nucleus | 48.39 | 50.72 |
| Zm00001d053707_P001 | Maize | nucleus | 48.39 | 50.48 |
| EES06418 | Sorghum | nucleus | 49.77 | 50.47 |
| TraesCS6D01G161300.1 | Wheat | nucleus | 47.93 | 50.24 |
| Solyc12g005960.1.1 | Tomato | nucleus | 43.32 | 48.7 |
| Zm00001d001907_P001 | Maize | nucleus, plastid | 39.17 | 48.3 |
| VIT_19s0090g01080.t01 | Wine grape | nucleus | 57.14 | 48.06 |
| PGSC0003DMT400036071 | Potato | nucleus | 41.94 | 47.89 |
| Zm00001d026563_P001 | Maize | nucleus | 39.17 | 47.75 |
| TraesCS2B01G572500.1 | Wheat | nucleus | 41.94 | 47.64 |
| Os04t0669200-01 | Rice | nucleus | 41.47 | 47.37 |
| TraesCS2D01G543900.1 | Wheat | nucleus | 41.94 | 47.15 |
| TraesCS2A01G542700.1 | Wheat | nucleus | 41.47 | 46.63 |
| CDY25733 | Canola | nucleus | 29.49 | 46.38 |
| OQU82539 | Sorghum | nucleus, plastid | 40.09 | 45.79 |
| Os06t0691100-00 | Rice | nucleus | 39.63 | 45.74 |
| CDY70796 | Canola | nucleus | 33.18 | 44.72 |
| TraesCS7B01G335700.1 | Wheat | nucleus | 39.63 | 44.33 |
| HORVU7Hr1G099670.1 | Barley | nucleus | 38.71 | 44.21 |
| CDY02523 | Canola | nucleus | 34.56 | 44.12 |
| TraesCS7A01G436400.1 | Wheat | nucleus | 39.63 | 44.1 |
| CDY34104 | Canola | nucleus | 32.72 | 43.83 |
| CDY34105 | Canola | nucleus | 31.8 | 43.67 |
| TraesCS7D01G426700.1 | Wheat | nucleus | 39.63 | 43.22 |
| CDY15673 | Canola | nucleus | 33.18 | 42.86 |
| CDY70175 | Canola | nucleus | 33.18 | 42.86 |
| EER88863 | Sorghum | nucleus | 38.25 | 42.56 |
| CDX90146 | Canola | nucleus | 33.64 | 42.44 |
| CDY69368 | Canola | nucleus | 33.18 | 41.86 |
| Zm00001d014565_P001 | Maize | nucleus | 36.87 | 41.45 |
| CDX97640 | Canola | nucleus | 35.94 | 41.27 |
| Zm00001d036536_P001 | Maize | nucleus | 37.33 | 41.12 |
| CDY15674 | Canola | nucleus | 32.72 | 39.89 |
| CDX98534 | Canola | nucleus | 35.94 | 39.8 |
| CDX82442 | Canola | nucleus | 37.33 | 39.71 |
| CDX75817 | Canola | nucleus | 37.33 | 39.71 |
| TraesCS6A01G131200.1 | Wheat | nucleus | 36.87 | 39.6 |
| TraesCS6D01G121100.1 | Wheat | nucleus | 36.87 | 39.22 |
| TraesCS6B01G159600.1 | Wheat | nucleus | 36.41 | 38.92 |
| Zm00001d053859_P001 | Maize | nucleus | 35.02 | 38.78 |
| CDY34107 | Canola | nucleus | 32.26 | 38.67 |
| CDY61906 | Canola | cytosol | 23.96 | 38.52 |
| CDY45936 | Canola | nucleus | 35.48 | 38.31 |
| CDY24111 | Canola | nucleus | 30.88 | 38.07 |
| CDY25874 | Canola | nucleus | 35.02 | 38.0 |
| CDX94610 | Canola | nucleus | 29.03 | 37.95 |
| CDX89866 | Canola | nucleus | 31.34 | 37.78 |
| CDY30806 | Canola | nucleus | 31.8 | 37.7 |
| CDX90145 | Canola | nucleus | 31.8 | 37.5 |
| CDY18185 | Canola | nucleus | 30.88 | 37.22 |
| CDY61213 | Canola | nucleus | 30.41 | 37.08 |
| CDY20105 | Canola | nucleus | 35.48 | 36.84 |
| CDY35734 | Canola | nucleus | 31.34 | 36.76 |
| CDY32314 | Canola | nucleus | 35.48 | 35.32 |
| CDY14914 | Canola | nucleus | 30.88 | 34.72 |
| CDX96955 | Canola | nucleus | 30.41 | 34.2 |
| CDX70526 | Canola | nucleus | 22.58 | 23.11 |
| CDX78545 | Canola | nucleus | 22.12 | 22.64 |
| CDY11748 | Canola | nucleus | 22.58 | 21.21 |
| CDX90126 | Canola | nucleus | 22.58 | 20.94 |
| CDX94591 | Canola | nucleus | 23.04 | 20.75 |
| CDY15690 | Canola | nucleus | 22.58 | 20.5 |
| CDY36131 | Canola | nucleus | 25.81 | 18.73 |
| CDY51586 | Canola | nucleus | 25.35 | 18.64 |
| CDY24422 | Canola | nucleus | 25.35 | 18.39 |
| CDY03876 | Canola | nucleus | 25.35 | 18.39 |
| CDY16048 | Canola | nucleus | 23.96 | 17.81 |
| CDY26605 | Canola | nucleus | 23.96 | 17.69 |
| CDY16037 | Canola | nucleus | 15.67 | 17.17 |
| CDY26598 | Canola | nucleus | 15.67 | 17.17 |
| CDX88931 | Canola | nucleus | 25.81 | 17.02 |
| CDX70826 | Canola | nucleus | 25.81 | 16.92 |
| CDY02618 | Canola | nucleus | 25.81 | 16.87 |
| CDY68296 | Canola | nucleus | 24.88 | 16.72 |
| CDY13901 | Canola | nucleus | 25.81 | 16.67 |
| CDY58106 | Canola | nucleus | 25.35 | 16.57 |
| CDY19407 | Canola | nucleus | 23.96 | 16.46 |
| CDY72607 | Canola | nucleus | 23.04 | 15.48 |
| CDX91091 | Canola | nucleus | 23.04 | 14.71 |
| CDX85621 | Canola | nucleus | 23.04 | 14.62 |
| CDX98022 | Canola | nucleus | 5.07 | 5.56 |
| CDY46294 | Canola | nucleus | 3.23 | 4.86 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078HCE7 | UniProt:A0A078HCE7 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY36045 | ProteinID:CDY36045 | ProteinID:CDY36045.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00059865001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31677 | PANTHER:PTHR31677:SF17 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EDC54F | SEG:seg | : | : | : | : |
Description
BnaC03g41530DBnaC03g41530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HCE7]
Coordinates
chrLK032366:+:108375..109419
Molecular Weight (calculated)
23776.0 Da
IEP (calculated)
9.556
GRAVY (calculated)
-0.623
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKGRGSSVV PHALHGSVKE PRYRGVRKRP WGRFAAEIRD PLKKSRVWLG TFDSAEEAAR AYDAAARNLR GPKAKTNFPI DCSPSSPLQP LNHRNQIDPF
101: MDHRLYAGEQ EVIIISRPAS STMSSTVKSC SGVRPASSSV AKPLPATKRY PRTPPVAPED CRSDCDSSSS VVDDGDDIAS SSSRRKPPFT FDLNFPPLDG
201: VDLFAGADDL HCTDLRL
101: MDHRLYAGEQ EVIIISRPAS STMSSTVKSC SGVRPASSSV AKPLPATKRY PRTPPVAPED CRSDCDSSSS VVDDGDDIAS SSSRRKPPFT FDLNFPPLDG
201: VDLFAGADDL HCTDLRL
001: MRKGRGSSVV GPALPVTAGG SVKEPRYRGV RKRPWGRFAA EIRDPLKKSR VWLGTFDSAV DAARAYDTAA RNLRGPKAKT NFPIDCSPSS PLQPLTYLHN
101: QNLCSPPVIQ NQIDPFMDHR LYGGGNFQEQ QQQQIISRPA SSSMSSTVKS CSGPRPMEAA AASSSVAKPL HAIKRYPRTP PVAPEDCHSD CDSSSSVIDD
201: GDDIASSSSR RKTPFQFDLN FPPLDGVDLF AGGIDDLHCT DLRL
101: QNLCSPPVIQ NQIDPFMDHR LYGGGNFQEQ QQQQIISRPA SSSMSSTVKS CSGPRPMEAA AASSSVAKPL HAIKRYPRTP PVAPEDCHSD CDSSSSVIDD
201: GDDIASSSSR RKTPFQFDLN FPPLDGVDLF AGGIDDLHCT DLRL
Arabidopsis Description
ERF7Ethylene-responsive transcription factor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.