Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038107.1-P | Field mustard | nucleus | 99.0 | 99.0 |
| CDY45936 | Canola | nucleus | 96.5 | 96.02 |
| CDY25733 | Canola | nucleus | 39.5 | 57.25 |
| CDY02523 | Canola | nucleus | 46.0 | 54.12 |
| CDY61213 | Canola | nucleus | 43.5 | 48.88 |
| CDY24111 | Canola | nucleus | 43.0 | 48.86 |
| AT1G53170.1 | Thale cress | nucleus | 45.0 | 48.65 |
| CDX97640 | Canola | nucleus | 44.0 | 46.56 |
| KRH55195 | Soybean | nucleus | 42.5 | 46.45 |
| CDY15673 | Canola | nucleus | 38.0 | 45.24 |
| CDY70175 | Canola | nucleus | 38.0 | 45.24 |
| CDY70796 | Canola | nucleus | 36.0 | 44.72 |
| CDX98534 | Canola | nucleus | 43.5 | 44.39 |
| CDX90146 | Canola | nucleus | 37.5 | 43.6 |
| CDY20105 | Canola | nucleus | 45.5 | 43.54 |
| CDY34104 | Canola | nucleus | 35.0 | 43.21 |
| CDX82442 | Canola | nucleus | 44.0 | 43.14 |
| CDY69368 | Canola | nucleus | 37.0 | 43.02 |
| CDX75817 | Canola | nucleus | 43.5 | 42.65 |
| KRH22040 | Soybean | nucleus | 41.0 | 42.49 |
| KRH27281 | Soybean | nucleus | 41.0 | 42.49 |
| CDY34105 | Canola | nucleus | 32.5 | 41.14 |
| CDY32314 | Canola | nucleus | 44.5 | 40.83 |
| CDY61906 | Canola | cytosol | 25.5 | 37.78 |
| CDY34107 | Canola | nucleus | 33.5 | 37.02 |
| CDY30806 | Canola | nucleus | 33.5 | 36.61 |
| CDY22810 | Canola | nucleus | 37.0 | 36.45 |
| CDY18185 | Canola | nucleus | 32.5 | 36.11 |
| CDY35734 | Canola | nucleus | 33.0 | 35.68 |
| CDY37113 | Canola | mitochondrion, nucleus | 37.0 | 35.58 |
| CDX89866 | Canola | nucleus | 32.0 | 35.56 |
| CDY15674 | Canola | nucleus | 31.5 | 35.39 |
| CDX90145 | Canola | nucleus | 32.5 | 35.33 |
| CDY36045 | Canola | nucleus | 38.0 | 35.02 |
| CDX82253 | Canola | nucleus | 37.5 | 34.88 |
| CDX94610 | Canola | nucleus | 28.5 | 34.34 |
| CDX96955 | Canola | nucleus | 32.0 | 33.16 |
| CDY14914 | Canola | nucleus | 32.0 | 33.16 |
| CDX70526 | Canola | nucleus | 25.5 | 24.06 |
| CDX78545 | Canola | nucleus | 25.0 | 23.58 |
| CDX90126 | Canola | nucleus | 24.0 | 20.51 |
| CDY11748 | Canola | nucleus | 23.5 | 20.35 |
| CDX94591 | Canola | nucleus | 24.0 | 19.92 |
| CDY15690 | Canola | nucleus | 23.5 | 19.67 |
| CDY36131 | Canola | nucleus | 25.0 | 16.72 |
| CDY16037 | Canola | nucleus | 16.5 | 16.67 |
| CDY26598 | Canola | nucleus | 16.5 | 16.67 |
| CDY03876 | Canola | nucleus | 24.5 | 16.39 |
| CDY72607 | Canola | nucleus | 26.0 | 16.1 |
| CDY24422 | Canola | nucleus | 24.0 | 16.05 |
| CDY51586 | Canola | nucleus | 23.5 | 15.93 |
| CDX91091 | Canola | nucleus | 27.0 | 15.88 |
| CDX85621 | Canola | nucleus | 27.0 | 15.79 |
| CDY19407 | Canola | nucleus | 24.5 | 15.51 |
| CDY68296 | Canola | nucleus | 25.0 | 15.48 |
| CDY16048 | Canola | nucleus | 22.5 | 15.41 |
| CDY02618 | Canola | nucleus | 25.5 | 15.36 |
| CDY26605 | Canola | nucleus | 22.5 | 15.31 |
| CDY13901 | Canola | nucleus | 25.0 | 14.88 |
| CDY58106 | Canola | nucleus | 24.5 | 14.76 |
| CDX88931 | Canola | nucleus | 23.5 | 14.29 |
| CDX70826 | Canola | nucleus | 23.5 | 14.2 |
| CDY46294 | Canola | nucleus | 4.0 | 5.56 |
| CDX98022 | Canola | nucleus | 5.0 | 5.05 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078GKT4 | UniProt:A0A078GKT4 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY25874 | ProteinID:CDY25874 | ProteinID:CDY25874.1 | ncoils:Coil | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00033322001 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EDBCD3 | SEG:seg | : | : | : | : |
Description
BnaA05g14650DBnaA05g14650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GKT4]
Coordinates
chrLK032181:+:420179..420781
Molecular Weight (calculated)
21726.8 Da
IEP (calculated)
9.481
GRAVY (calculated)
-0.526
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKSGSKPNP NPVENNAEEI HYRGVRKRPW GKYAAEIRDP FKRIRVWLGT FDTAQQAARA YDAAARELRG ANAKTNFPTL LELQLKGSGY TRGPRKSRTV
101: HSVSPLAARL APLHLRLSLG GSSGGGACYP QVPVARPLAA RPLAARPPVA RPVYCCNMTA CATCGAESES DSSSVLEFED ETEEKPQLLN LDLNFPPPAE
101: HSVSPLAARL APLHLRLSLG GSSGGGACYP QVPVARPLAA RPLAARPPVA RPVYCCNMTA CATCGAESES DSSSVLEFED ETEEKPQLLN LDLNFPPPAE
001: MAKMGLKPDP ATTNQTHNNA KEIRYRGVRK RPWGRYAAEI RDPGKKTRVW LGTFDTAEEA ARAYDTAARD FRGAKAKTNF PTFLELSDQK VPTGFARSPS
101: QSSTLDCASP PTLVVPSATA GNVPPQLELS LGGGGGGSCY QIPMSRPVYF LDLMGIGNVG RGQPPPVTSA FRSPVVHVAT KMACGAQSDS DSSSVVDFEG
201: GMEKRSQLLD LDLNLPPPSE QA
101: QSSTLDCASP PTLVVPSATA GNVPPQLELS LGGGGGGSCY QIPMSRPVYF LDLMGIGNVG RGQPPPVTSA FRSPVVHVAT KMACGAQSDS DSSSVVDFEG
201: GMEKRSQLLD LDLNLPPPSE QA
Arabidopsis Description
ERF4Ethylene-responsive transcription factor 4 [Source:UniProtKB/Swiss-Prot;Acc:O80340]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.