Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032881.1-P | Field mustard | nucleus | 95.14 | 95.14 |
| CDY15690 | Canola | nucleus | 75.69 | 45.61 |
| CDY11748 | Canola | nucleus | 72.92 | 45.45 |
| CDX94591 | Canola | nucleus | 75.69 | 45.23 |
| CDX90126 | Canola | nucleus | 72.92 | 44.87 |
| CDX70526 | Canola | nucleus | 20.14 | 13.68 |
| CDX78545 | Canola | nucleus | 20.14 | 13.68 |
| CDX91091 | Canola | nucleus | 18.06 | 7.65 |
| CDY72607 | Canola | nucleus | 16.67 | 7.43 |
| CDY16037 | Canola | nucleus | 9.72 | 7.07 |
| CDY26598 | Canola | nucleus | 9.72 | 7.07 |
| CDX85621 | Canola | nucleus | 16.67 | 7.02 |
| CDY61906 | Canola | cytosol | 6.25 | 6.67 |
| CDY34105 | Canola | nucleus | 6.94 | 6.33 |
| CDY70796 | Canola | nucleus | 6.94 | 6.21 |
| GSMUA_Achr8P30180_001 | Banana | nucleus | 13.19 | 6.09 |
| CDY70175 | Canola | nucleus | 6.94 | 5.95 |
| CDY69368 | Canola | nucleus | 6.94 | 5.81 |
| CDX90146 | Canola | nucleus | 6.94 | 5.81 |
| CDY34104 | Canola | nucleus | 6.25 | 5.56 |
| CDY15673 | Canola | nucleus | 6.25 | 5.36 |
| CDY68296 | Canola | nucleus | 11.81 | 5.26 |
| CDX70826 | Canola | nucleus | 11.81 | 5.14 |
| CDY02618 | Canola | nucleus | 11.81 | 5.12 |
| CDY58106 | Canola | nucleus | 11.81 | 5.12 |
| Zm00001d022488_P001 | Maize | nucleus | 11.11 | 5.08 |
| CDY13901 | Canola | nucleus | 11.81 | 5.06 |
| CDY14914 | Canola | nucleus | 6.25 | 4.66 |
| TraesCS2D01G118200.1 | Wheat | nucleus, plastid | 9.03 | 4.41 |
| TraesCS2A01G116900.1 | Wheat | nucleus | 9.03 | 4.35 |
| CDX88931 | Canola | nucleus | 9.72 | 4.26 |
| CDX96955 | Canola | nucleus | 5.56 | 4.15 |
| Os07t0669500-01 | Rice | nucleus, plastid | 9.03 | 4.09 |
| Zm00001d007119_P001 | Maize | nucleus | 8.33 | 4.05 |
| CDX98022 | Canola | nucleus | 5.56 | 4.04 |
| CDY25874 | Canola | nucleus | 5.56 | 4.0 |
| CDY45936 | Canola | nucleus | 5.56 | 3.98 |
| KXG36907 | Sorghum | nucleus | 9.03 | 3.98 |
| KRH75649 | Soybean | nucleus | 7.64 | 3.97 |
| CDY22810 | Canola | nucleus | 5.56 | 3.94 |
| CDY15674 | Canola | nucleus | 4.86 | 3.93 |
| TraesCS2B01G136100.1 | Wheat | nucleus | 8.33 | 3.91 |
| CDX89866 | Canola | nucleus | 4.86 | 3.89 |
| CDY18185 | Canola | nucleus | 4.86 | 3.89 |
| CDY37113 | Canola | mitochondrion, nucleus | 5.56 | 3.85 |
| CDX90145 | Canola | nucleus | 4.86 | 3.8 |
| CDY35734 | Canola | nucleus | 4.86 | 3.78 |
| CDY02523 | Canola | nucleus | 4.17 | 3.53 |
| CDY19407 | Canola | nucleus | 7.64 | 3.48 |
| CDY34107 | Canola | nucleus | 4.17 | 3.31 |
| CDY30806 | Canola | nucleus | 4.17 | 3.28 |
| CDX82253 | Canola | nucleus | 4.86 | 3.26 |
| CDY36045 | Canola | nucleus | 4.86 | 3.23 |
| CDX97640 | Canola | nucleus | 4.17 | 3.17 |
| CDX98534 | Canola | nucleus | 4.17 | 3.06 |
| CDX94610 | Canola | nucleus | 3.47 | 3.01 |
| CDY36131 | Canola | nucleus | 6.25 | 3.01 |
| CDX82442 | Canola | nucleus | 4.17 | 2.94 |
| CDX75817 | Canola | nucleus | 4.17 | 2.94 |
| CDY25733 | Canola | nucleus | 2.78 | 2.9 |
| CDY24111 | Canola | nucleus | 3.47 | 2.84 |
| CDY61213 | Canola | nucleus | 3.47 | 2.81 |
| CDY26605 | Canola | nucleus | 5.56 | 2.72 |
| CDY51586 | Canola | nucleus | 5.56 | 2.71 |
| CDY24422 | Canola | nucleus | 5.56 | 2.68 |
| CDY16048 | Canola | nucleus | 4.86 | 2.4 |
| CDY20105 | Canola | nucleus | 3.47 | 2.39 |
| CDY03876 | Canola | nucleus | 4.86 | 2.34 |
| CDY32314 | Canola | nucleus | 3.47 | 2.29 |
Protein Annotations
| EnsemblPlants:CDY46294 | EnsemblPlantsGene:GSBRNA2T00083676001 | ProteinID:CDY46294 | ProteinID:CDY46294.1 | SEG:seg | UniParc:UPI0004EE1F26 |
| UniProt:A0A078IAE8 | MapMan:35.1 | : | : | : | : |
Description
BnaC05g21620DBnaC05g21620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IAE8]
Coordinates
chrLK032659:-:162531..162965
Molecular Weight (calculated)
16352.9 Da
IEP (calculated)
3.582
GRAVY (calculated)
-0.907
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRGSSVTSF ISPDESQRFI SELFNHSFQP EDPNNSTTNN LYSSTNTENQ NANEFSYNGW PHESECDYQS INTNDEHCDH ELPPLPPSTC FGAELTYPET
101: DSYWNVANTS MDYSFELDAF VDQNSPVESG TEGFDFSSST FFYQ
101: DSYWNVANTS MDYSFELDAF VDQNSPVESG TEGFDFSSST FFYQ
001: MEFNGNLNAG SCSRSKKSHR QKQQQPQPQP QQHIEEIKYV GVRRRPWGRY AAEIRNPTTK ERYWLGTFDT AEEAALAYDR AARSIRGLTA RTNFVYSDMP
101: RGSSVTSFVS PDESQRFISE LFNPPSQLEA TNSNNNNNNN LYSSTNNQNQ NSIEFSYNGW PQEAECGYQS ITSNAEHCDH ELPPLPPSTC FGAELRIPET
201: DSYWNVAHAS IDTFAFELDG FVDQNSLGQS GTEGFNSLPS TFFYQ
101: RGSSVTSFVS PDESQRFISE LFNPPSQLEA TNSNNNNNNN LYSSTNNQNQ NSIEFSYNGW PQEAECGYQS ITSNAEHCDH ELPPLPPSTC FGAELRIPET
201: DSYWNVAHAS IDTFAFELDG FVDQNSLGQS GTEGFNSLPS TFFYQ
Arabidopsis Description
ERF087Ethylene-responsive transcription factor ERF087 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ90]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.