Factsheet for GSMUA_Achr8P30180_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P35320_001	Banana	nucleus	20.83	45.45
GSMUA_Achr7P00350_001	Banana	nucleus	15.71	44.55
GSMUA_Achr7P17910_001	Banana	nucleus	20.83	40.12
GSMUA_AchrUn_...	Banana	nucleus	13.78	39.81
GSMUA_Achr3P13010_001	Banana	nucleus	17.31	35.29
TraesCS2D01G118200.1	Wheat	nucleus, plastid	32.37	34.24
TraesCS2A01G116900.1	Wheat	nucleus	32.37	33.78
KRH50906	Soybean	nucleus	37.18	33.53
GSMUA_Achr8P06870_001	Banana	nucleus	19.55	32.97
TraesCS2B01G136100.1	Wheat	nucleus	32.37	32.9
Zm00001d007119_P001	Maize	nucleus	31.09	32.77
KRH02219	Soybean	nucleus	37.18	32.77
Os07t0669500-01	Rice	nucleus, plastid	33.01	32.39
Zm00001d022488_P001	Maize	nucleus	32.37	32.06
GSMUA_Achr5P26850_001	Banana	nucleus	19.55	31.94
GSMUA_Achr7P03640_001	Banana	nucleus	16.67	31.33
Bra006466.1-P	Field mustard	nucleus, plastid	31.09	31.29
Solyc01g067540.1.1	Tomato	nucleus	32.05	31.15
GSMUA_Achr8P33590_001	Banana	nucleus	18.59	31.02
GSMUA_Achr4P04060_001	Banana	mitochondrion	15.71	31.01
Bra023684.1-P	Field mustard	nucleus, plastid	30.77	30.67
GSMUA_Achr8P15820_001	Banana	nucleus	16.67	30.59
PGSC0003DMT400058356	Potato	nucleus	33.33	30.5
CDX88931	Canola	nucleus	32.05	30.4
KXG36907	Sorghum	nucleus	31.73	30.28
CDX70826	Canola	nucleus	32.05	30.21
GSMUA_Achr3P29290_001	Banana	nucleus	15.38	30.19
Bra002168.1-P	Field mustard	nucleus, plastid	30.45	29.97
CDY02618	Canola	nucleus	31.73	29.82
GSMUA_Achr4P06170_001	Banana	nucleus	17.63	29.73
CDY68296	Canola	nucleus	30.77	29.72
GSMUA_Achr3P23710_001	Banana	nucleus	19.23	29.7
AT5G18560.1	Thale cress	nucleus	33.01	29.6
GSMUA_Achr6P01440_001	Banana	nucleus	17.63	29.57
CDY58106	Canola	nucleus	31.41	29.52
GSMUA_Achr4P11430_001	Banana	nucleus	15.38	29.27
KRH75649	Soybean	nucleus	25.96	29.24
CDY13901	Canola	nucleus	31.41	29.17
GSMUA_Achr8P15830_001	Banana	nucleus	18.59	29.15
GSMUA_Achr1P25890_001	Banana	nucleus	14.74	28.93
GSMUA_AchrUn_...	Banana	nucleus	16.35	28.81
GSMUA_Achr3P02360_001	Banana	nucleus	24.68	28.62
GSMUA_Achr3P19420_001	Banana	nucleus	25.96	28.52
GSMUA_Achr10P...	Banana	nucleus	23.4	27.97
GSMUA_Achr6P00240_001	Banana	nucleus	15.38	27.91
GSMUA_Achr9P11480_001	Banana	nucleus	19.87	27.43
GSMUA_Achr1P18230_001	Banana	nucleus	16.67	27.37
GSMUA_Achr4P06660_001	Banana	nucleus	16.35	26.56
GSMUA_Achr8P03550_001	Banana	nucleus	17.63	25.46
GSMUA_Achr6P00250_001	Banana	nucleus	19.23	25.1
GSMUA_Achr4P23620_001	Banana	nucleus	17.95	25.0
GSMUA_Achr10P...	Banana	nucleus	17.63	24.77
GSMUA_AchrUn_...	Banana	nucleus	21.79	24.29
GSMUA_Achr4P33270_001	Banana	nucleus	19.55	22.93
GSMUA_Achr9P01870_001	Banana	nucleus	21.15	22.92
GSMUA_Achr5P09940_001	Banana	mitochondrion	16.99	22.27
Bra032881.1-P	Field mustard	nucleus	6.73	14.58
CDY46294	Canola	nucleus	6.09	13.19

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0000003
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009653	GO:GO:0009791
GO:GO:0009908	GO:GO:0009987	GO:GO:0010102	GO:GO:0010432	GO:GO:0010451	GO:GO:0010582
GO:GO:0040007	GO:GO:0043565	GO:GO:0044212	EnsemblPlantsGene:GSMUA_Achr8G30180_001	EnsemblPlants:GSMUA_Achr8P30180_001	EnsemblPlants:GSMUA_Achr8T30180_001
InterPro:IPR001471	InterPro:IPR036955	UniProt:M0TUX0	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31677	PANTHER:PTHR31677:SF40	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0002952D5E	SEG:seg

Description

Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G30180_001]

Coordinates

chr8:-:32337196..32338218

Molecular Weight (calculated)

34107.5 Da

IEP (calculated)

7.303

GRAVY (calculated)

-0.557

Length

312 amino acids

Sequence
(BLAST)

001: MDFCQGKPYH SSSLSSPSSS SPVAGTSSGE RRGRRKPTEP GRFLGVRRRP WGRYAAEIRD PTTKERHWLG TFDTAQEAAM AYDRAALAMK GTQARTNFVY
101: ADTPLTTFHA VTPFHSQSFI PQPMPPLPGQ PHQLVGAATA IQPSNHSNFS IQSHRHSISA PSRRDVDSLL FRSSRDATNM PAFGSPAEMD MSNDFLFSDD
201: TRSGYLSSIV QESRLRSSRK HSSANRGNSS SSESNAQVLS PSNQDFPCLA EMSKGFWMDE PVWELSACGF PDANDINMDN LGASLPQVSV SVSTSPSVSS
301: LTDVFDLGYP LF

Best Arabidopsis Sequence Match ( AT5G18560.1 )
(BLAST)

001: MSTSKTLDHN KPFETSQTQM GFALIHQNTS ANTTTTTTTG ERRGRRSKQA EPGRFLGVRR RPWGRYAAEI RDPTTKERHW LGTFDTAHEA ALAYDRAALS
101: MRGTQARTNF VYTPTDVHTI LTNPNLHSLI VSPYNNNQSF LPNSSPQFVI DHHPHYQNYH QPQQPKHTLP QTVLPAASFK TPVRHQSVDI QAFGNSPQNS
201: SSNGSLSSSL DEENNFFFSL TSEEHNKSNN NSGYLDCIVP NHCLKPPPEA TTTQNQAGAS FTTPVASKAS EPYGGFSNSY FEDGEMMMMN HHEFGSCDLS
301: AMITNYGAAA ASMSMEDYGM MEPQDLSSSS IAAFGDVVAD TTGFYSVF

Arabidopsis Description

ERF086PUCHI [Source:UniProtKB/TrEMBL;Acc:A0A178URC3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.