Factsheet for GSMUA_Achr8P06870_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

nucleus: 23599278

gfp PMID: 23599278 doi

YY Xiao, JY Chen, JF Kuang, W Shan, H Xie, YM Jiang, WJ Lu

State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources/Guangdong Key Laboratory for Postharvest Science, College of Horticultural Science, South China Agricultural University, Guangzhou 510642, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P00350_001	Banana	nucleus	38.38	64.55
GSMUA_Achr3P23710_001	Banana	nucleus	57.84	52.97
KRH55195	Soybean	nucleus	51.89	52.46
KRH26242	Soybean	nucleus	36.22	51.94
KRH27281	Soybean	nucleus	50.27	48.19
KRH22040	Soybean	nucleus	49.73	47.67
GSMUA_AchrUn_...	Banana	nucleus	27.57	47.22
GSMUA_Achr5P26850_001	Banana	nucleus	48.65	47.12
GSMUA_Achr7P03640_001	Banana	nucleus	40.0	44.58
VIT_19s0014g02240.t01	Wine grape	nucleus	51.89	43.64
GSMUA_Achr8P33590_001	Banana	nucleus	43.24	42.78
GSMUA_Achr8P15830_001	Banana	nucleus	45.41	42.21
GSMUA_Achr3P13010_001	Banana	nucleus	34.59	41.83
GSMUA_AchrUn_...	Banana	nucleus	40.0	41.81
GSMUA_Achr9P11480_001	Banana	nucleus	49.73	40.71
GSMUA_Achr4P23620_001	Banana	nucleus	49.19	40.62
GSMUA_Achr6P00250_001	Banana	nucleus	52.43	40.59
GSMUA_Achr1P25890_001	Banana	nucleus	34.59	40.25
GSMUA_Achr3P29290_001	Banana	nucleus	32.97	38.36
GSMUA_Achr8P03550_001	Banana	nucleus	44.32	37.96
GSMUA_Achr4P04060_001	Banana	mitochondrion	31.89	37.34
GSMUA_Achr4P06170_001	Banana	nucleus	36.76	36.76
GSMUA_Achr4P11430_001	Banana	nucleus	31.89	35.98
GSMUA_Achr4P06660_001	Banana	nucleus	36.22	34.9
GSMUA_Achr10P...	Banana	nucleus	41.62	34.68
GSMUA_Achr6P01440_001	Banana	nucleus	34.59	34.41
GSMUA_Achr6P35320_001	Banana	nucleus	26.49	34.27
GSMUA_Achr8P15820_001	Banana	nucleus	31.35	34.12
GSMUA_Achr6P00240_001	Banana	nucleus	31.35	33.72
GSMUA_Achr1P18230_001	Banana	nucleus	34.59	33.68
GSMUA_Achr4P33270_001	Banana	nucleus	45.95	31.95
GSMUA_Achr7P17910_001	Banana	nucleus	25.95	29.63
GSMUA_Achr5P09940_001	Banana	mitochondrion	37.3	28.99
GSMUA_Achr3P19420_001	Banana	nucleus	38.92	25.35
GSMUA_Achr10P...	Banana	nucleus	29.73	21.07
GSMUA_Achr3P02360_001	Banana	nucleus	29.73	20.45
GSMUA_Achr8P30180_001	Banana	nucleus	32.97	19.55
GSMUA_AchrUn_...	Banana	nucleus	27.03	17.86
GSMUA_Achr9P01870_001	Banana	nucleus	26.49	17.01

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr8G06870_001	EnsemblPlants:GSMUA_Achr8P06870_001
EnsemblPlants:GSMUA_Achr8T06870_001	InterPro:IPR001471	InterPro:IPR036955	UniProt:M0TN90	PFAM:PF00847	PIRSF:PIRSF038123
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31677	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0002962CEA
SEG:seg	:	:	:	:	:

Description

Putative Ethylene-responsive transcription factor 4 [Source:GMGC_GENE;Acc:GSMUA_Achr8G06870_001]

Coordinates

chr8:+:4472928..4473758

Molecular Weight (calculated)

19452.0 Da

IEP (calculated)

10.804

GRAVY (calculated)

-0.355

Length

185 amino acids

Sequence
(BLAST)

001: MSPRAKNSDG GEGGGETKEM RFRGVRKRPW GRYAAEIRDP AKKSRVWLGT FDTAEEAARA YDTVALQFRG PKAKTNFPIF TAAAGAGTAP SSPSSSGNTV
101: ESSTPSAPPP LELELGHAAA RFPFLHARPF LFLGAASRSD AAAASAALTG FKGIGTRVSP TVMAAQARRL PFDLDLNLPP PPEVA

Best Arabidopsis Sequence Match ( AT1G28370.2 )
(BLAST)

001: MMSSQTSSHN KLIKLPQRFF FLHKQFFLHK QILLFVVVMA PTVKTAAVKT NEGNGVRYRG VRKRPWGRYA AEIRDPFKKS RVWLGTFDTP EEAARAYDKR
101: AIEFRGAKAK TNFPCYNINA HCLSLTQSLS QSSTVESSFP NLNLGSDSVS SRFPFPKIQV KAGMMVFDER SESDSSSVVM DVVRYEGRRV VLDLDLNFPP
201: PPEN

Arabidopsis Description

ERF11ERF domain protein 11 [Source:TAIR;Acc:AT1G28370]
SUBAcon: [mitochondrion,plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.