Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- nucleus 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 66.54 | 68.58 |
| TraesCS2B01G305500.1 | Wheat | plastid | 54.28 | 55.73 |
| TraesCS2A01G288700.1 | Wheat | plastid | 54.28 | 55.73 |
| HORVU2Hr1G071470.1 | Barley | plastid | 54.28 | 55.51 |
| TraesCS2D01G286900.1 | Wheat | plastid | 53.9 | 55.34 |
| Zm00001d025298_P001 | Maize | plastid | 53.9 | 53.31 |
| Zm00001d003871_P001 | Maize | plastid | 53.53 | 53.14 |
| EES10693 | Sorghum | plastid | 54.65 | 51.4 |
| Os04t0399800-00 | Rice | nucleus | 54.28 | 50.0 |
| GSMUA_AchrUn_... | Banana | nucleus | 17.84 | 44.44 |
| GSMUA_Achr7P00350_001 | Banana | nucleus | 17.84 | 43.64 |
| AT5G13910.1 | Thale cress | nucleus | 32.71 | 41.71 |
| GSMUA_Achr6P35320_001 | Banana | nucleus | 21.56 | 40.56 |
| Bra006222.1-P | Field mustard | nucleus | 31.6 | 40.28 |
| KRH06790 | Soybean | nucleus | 34.57 | 39.57 |
| CDX78545 | Canola | nucleus | 30.86 | 39.15 |
| CDX70526 | Canola | nucleus | 30.48 | 38.68 |
| KRH08427 | Soybean | nucleus | 39.03 | 38.32 |
| KRH70088 | Soybean | nucleus | 38.29 | 37.59 |
| VIT_14s0068g00860.t01 | Wine grape | nucleus | 35.69 | 36.92 |
| GSMUA_Achr7P17910_001 | Banana | nucleus | 21.19 | 35.19 |
| PGSC0003DMT400005596 | Potato | nucleus, plastid | 25.28 | 34.69 |
| GSMUA_Achr7P03640_001 | Banana | nucleus | 21.19 | 34.34 |
| GSMUA_Achr3P13010_001 | Banana | nucleus | 19.33 | 33.99 |
| GSMUA_Achr1P25890_001 | Banana | nucleus | 20.07 | 33.96 |
| GSMUA_Achr8P33590_001 | Banana | nucleus | 23.42 | 33.69 |
| GSMUA_Achr4P04060_001 | Banana | mitochondrion | 19.33 | 32.91 |
| GSMUA_Achr4P11430_001 | Banana | nucleus | 19.33 | 31.71 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.82 | 31.64 |
| GSMUA_Achr6P00240_001 | Banana | nucleus | 20.07 | 31.4 |
| GSMUA_Achr3P29290_001 | Banana | nucleus | 18.22 | 30.82 |
| GSMUA_Achr4P06170_001 | Banana | nucleus | 21.19 | 30.81 |
| GSMUA_Achr8P15820_001 | Banana | nucleus | 19.33 | 30.59 |
| GSMUA_Achr8P06870_001 | Banana | nucleus | 20.45 | 29.73 |
| GSMUA_Achr6P01440_001 | Banana | nucleus | 19.7 | 28.49 |
| GSMUA_Achr1P18230_001 | Banana | nucleus | 20.07 | 28.42 |
| GSMUA_Achr8P15830_001 | Banana | nucleus | 20.82 | 28.14 |
| Solyc11g045680.1.1 | Tomato | nucleus, plastid | 29.74 | 27.49 |
| GSMUA_Achr3P23710_001 | Banana | nucleus | 20.45 | 27.23 |
| GSMUA_Achr5P26850_001 | Banana | nucleus | 19.33 | 27.23 |
| GSMUA_Achr4P06660_001 | Banana | nucleus | 19.33 | 27.08 |
| PGSC0003DMT400005585 | Potato | nucleus, plastid | 28.62 | 26.55 |
| GSMUA_Achr9P11480_001 | Banana | nucleus | 21.56 | 25.66 |
| GSMUA_Achr6P00250_001 | Banana | nucleus | 22.68 | 25.52 |
| Solyc11g045690.1.1 | Tomato | nucleus, plastid | 28.62 | 25.5 |
| GSMUA_Achr4P23620_001 | Banana | nucleus | 21.19 | 25.45 |
| Bra023440.1-P | Field mustard | nucleus | 31.6 | 25.22 |
| CDX91091 | Canola | nucleus | 31.6 | 25.0 |
| GSMUA_Achr8P30180_001 | Banana | nucleus | 28.62 | 24.68 |
| CDX85621 | Canola | nucleus | 31.23 | 24.56 |
| GSMUA_Achr8P03550_001 | Banana | nucleus | 19.7 | 24.54 |
| Bra008793.1-P | Field mustard | nucleus | 28.62 | 23.99 |
| GSMUA_Achr3P19420_001 | Banana | nucleus | 25.28 | 23.94 |
| CDY72607 | Canola | nucleus | 28.62 | 23.84 |
| GSMUA_Achr5P09940_001 | Banana | mitochondrion | 20.45 | 23.11 |
| GSMUA_Achr4P33270_001 | Banana | nucleus | 21.56 | 21.8 |
| GSMUA_AchrUn_... | Banana | nucleus | 21.93 | 21.07 |
| GSMUA_Achr10P... | Banana | nucleus | 16.73 | 20.27 |
| GSMUA_Achr9P01870_001 | Banana | nucleus | 21.19 | 19.79 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr3G02360_001 | EnsemblPlants:GSMUA_Achr3P02360_001 | EnsemblPlants:GSMUA_Achr3T02360_001 |
| InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M0SB54 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31677 | PANTHER:PTHR31677:SF40 | SMART:SM00380 | SUPFAM:SSF54171 | SignalP:SignalP-noTM | UniParc:UPI0002953496 |
| SEG:seg | : | : | : | : | : |
Description
Putative Ethylene-responsive transcription factor LEP [Source:GMGC_GENE;Acc:GSMUA_Achr3G02360_001]
Coordinates
chr3:+:1560484..1561389
Molecular Weight (calculated)
28417.8 Da
IEP (calculated)
5.056
GRAVY (calculated)
-0.467
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MQTQPHTNIA ACCCLLFLSR MGFSFFFSTS SSSSSSSTPV SGTAQDKKSK RRQPQDNGDE ANGSGGSNTT TEGGGMRYLG VRRRPWGRYA AEIRDPATKE
101: RHWLGTFDTA EEAAVAYDRA ARALRGPRAR TNFAYPDLPP GSSLTPFLSP DLQPPPCSFL VSTPPPVQAT LPDAEQGLQY PASALPPLPQ SPPPAPEVAS
201: PWDFGGATAG GEEHLAGLGE FGGYGSPASH GIFFEEGYVH SPLFGPMPAV DDAAADGFQL GGSSSSYYY
101: RHWLGTFDTA EEAAVAYDRA ARALRGPRAR TNFAYPDLPP GSSLTPFLSP DLQPPPCSFL VSTPPPVQAT LPDAEQGLQY PASALPPLPQ SPPPAPEVAS
201: PWDFGGATAG GEEHLAGLGE FGGYGSPASH GIFFEEGYVH SPLFGPMPAV DDAAADGFQL GGSSSSYYY
001: MNTTSSKSKK KQDDQVGTRF LGVRRRPWGR YAAEIRDPTT KERHWLGTFD TAEEAALAYD RAARSMRGTR ARTNFVYSDM PPSSSVTSIV SPDDPPPPPP
101: PPAPPSNDPV DYMMMFNQYS STDSPMLQPH CDQVDSYMFG GSQSSNSYCY SNDSSNELPP LPSDLSNSCY SQPQWTWTGD DYSSEYVHSP MFSRMPPVSD
201: SFPQGFNYFG S
101: PPAPPSNDPV DYMMMFNQYS STDSPMLQPH CDQVDSYMFG GSQSSNSYCY SNDSSNELPP LPSDLSNSCY SQPQWTWTGD DYSSEYVHSP MFSRMPPVSD
201: SFPQGFNYFG S
Arabidopsis Description
LEPLEP [Source:UniProtKB/TrEMBL;Acc:A0A178UQP2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.