Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P00350_001 | Banana | nucleus | 24.06 | 58.18 |
| GSMUA_AchrUn_... | Banana | nucleus | 21.05 | 51.85 |
| GSMUA_Achr6P00250_001 | Banana | nucleus | 46.24 | 51.46 |
| GSMUA_Achr4P23620_001 | Banana | nucleus | 43.23 | 51.34 |
| GSMUA_Achr9P11480_001 | Banana | nucleus | 42.48 | 50.0 |
| GSMUA_Achr3P13010_001 | Banana | nucleus | 27.07 | 47.06 |
| GSMUA_Achr8P06870_001 | Banana | nucleus | 31.95 | 45.95 |
| GSMUA_Achr4P04060_001 | Banana | mitochondrion | 26.69 | 44.94 |
| GSMUA_Achr8P03550_001 | Banana | nucleus | 36.47 | 44.91 |
| GSMUA_Achr8P15830_001 | Banana | nucleus | 33.08 | 44.22 |
| GSMUA_Achr10P... | Banana | nucleus | 36.09 | 43.24 |
| GSMUA_Achr7P03640_001 | Banana | nucleus | 26.69 | 42.77 |
| GSMUA_Achr1P25890_001 | Banana | nucleus | 25.19 | 42.14 |
| GSMUA_Achr8P33590_001 | Banana | nucleus | 29.32 | 41.71 |
| PGSC0003DMT400068959 | Potato | nucleus | 34.59 | 41.07 |
| Solyc07g053740.1.1 | Tomato | nucleus | 34.59 | 40.89 |
| GSMUA_Achr5P26850_001 | Banana | nucleus | 29.32 | 40.84 |
| GSMUA_Achr4P06170_001 | Banana | nucleus | 27.82 | 40.0 |
| CDX89866 | Canola | nucleus | 27.07 | 40.0 |
| Bra015266.1-P | Field mustard | nucleus | 27.07 | 39.34 |
| GSMUA_AchrUn_... | Banana | nucleus | 25.94 | 38.98 |
| GSMUA_Achr1P18230_001 | Banana | nucleus | 27.82 | 38.95 |
| CDY18185 | Canola | nucleus | 26.32 | 38.89 |
| Solyc10g009110.1.1 | Tomato | nucleus | 32.33 | 38.74 |
| PGSC0003DMT400058751 | Potato | nucleus | 32.71 | 38.5 |
| GSMUA_Achr3P23710_001 | Banana | nucleus | 28.95 | 38.12 |
| GSMUA_Achr3P29290_001 | Banana | nucleus | 22.56 | 37.74 |
| GSMUA_Achr4P11430_001 | Banana | nucleus | 22.93 | 37.2 |
| GSMUA_Achr6P01440_001 | Banana | nucleus | 25.19 | 36.02 |
| GSMUA_Achr8P15820_001 | Banana | nucleus | 22.93 | 35.88 |
| GSMUA_Achr6P35320_001 | Banana | nucleus | 18.8 | 34.97 |
| GSMUA_Achr4P06660_001 | Banana | nucleus | 24.06 | 33.33 |
| GSMUA_Achr6P00240_001 | Banana | nucleus | 21.43 | 33.14 |
| Solyc03g006320.1.1 | Tomato | nucleus, plastid | 26.69 | 32.87 |
| PGSC0003DMT400033391 | Potato | nucleus | 26.69 | 30.87 |
| GSMUA_Achr7P17910_001 | Banana | nucleus | 18.8 | 30.86 |
| PGSC0003DMT400035731 | Potato | nucleus | 33.08 | 29.63 |
| GSMUA_Achr3P19420_001 | Banana | nucleus | 30.45 | 28.52 |
| GSMUA_Achr5P09940_001 | Banana | mitochondrion | 24.81 | 27.73 |
| GSMUA_Achr10P... | Banana | nucleus | 22.56 | 22.99 |
| GSMUA_Achr3P02360_001 | Banana | nucleus | 21.8 | 21.56 |
| GSMUA_Achr9P01870_001 | Banana | nucleus | 22.56 | 20.83 |
| GSMUA_AchrUn_... | Banana | nucleus | 21.05 | 20.0 |
| GSMUA_Achr8P30180_001 | Banana | nucleus | 22.93 | 19.55 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSMUA_Achr4G33270_001 |
| EnsemblPlants:GSMUA_Achr4P33270_001 | EnsemblPlants:GSMUA_Achr4T33270_001 | InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M0SU89 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31677 | PANTHER:PTHR31677:SF42 | SMART:SM00380 | SUPFAM:SSF54171 |
| TMHMM:TMhelix | UniParc:UPI0002966832 | SEG:seg | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G33270_001]
Coordinates
chr4:-:29740405..29741634
Molecular Weight (calculated)
28337.7 Da
IEP (calculated)
10.489
GRAVY (calculated)
0.280
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MTPREQPAAC GRGRAAGGDG GGKETHFRGV RKRPWGRYAA EIRDPGKKSR LWLGTFDTAE EAARAYDAAA RQFRGSKAKT NFPYPSPGIV VVATAAGGGS
101: PSSQSSTVES SGREASAAVP PLAIPLSPSL DRGLVHRGGA RFPFQPFPAI AAHAMPAAHP CFLFDSIVRP DKSATAAMNH HRLTLCPPMM IAGLHGRMAR
201: GSQSDSDYSS IGGSAWVDAS APFFLPFLPL ILIYSIIIII IIIIIIIIII IIIIIIIIII IISFFL
101: PSSQSSTVES SGREASAAVP PLAIPLSPSL DRGLVHRGGA RFPFQPFPAI AAHAMPAAHP CFLFDSIVRP DKSATAAMNH HRLTLCPPMM IAGLHGRMAR
201: GSQSDSDYSS IGGSAWVDAS APFFLPFLPL ILIYSIIIII IIIIIIIIII IIIIIIIIII IISFFL
001: MAPRQANGRS IAVSEGGGGK TMTMTTMRKE VHFRGVRKRP WGRYAAEIRD PGKKTRVWLG TFDTAEEAAR AYDTAAREFR GSKAKTNFPL PGESTTVNDG
101: GENDSYVNRT TVTTAREMTR QRFPFACHRE RKVVGGYASA GFFFDPSRAA SLRAELSRVC PVRFDPVNIE LSIGIRETVK VEPRRELNLD LNLAPPVVDV
101: GENDSYVNRT TVTTAREMTR QRFPFACHRE RKVVGGYASA GFFFDPSRAA SLRAELSRVC PVRFDPVNIE LSIGIRETVK VEPRRELNLD LNLAPPVVDV
Arabidopsis Description
ERF9Ethylene-responsive transcription factor 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE67]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.