Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400058751 | Potato | nucleus | 90.54 | 88.94 |
| KRH32582 | Soybean | nucleus | 25.68 | 62.64 |
| GSMUA_Achr7P00350_001 | Banana | nucleus | 29.73 | 60.0 |
| VIT_10s0003g00140.t01 | Wine grape | nucleus | 54.95 | 53.74 |
| KRH21384 | Soybean | nucleus | 50.45 | 50.45 |
| KRH10927 | Soybean | nucleus | 48.2 | 48.86 |
| VIT_12s0028g03270.t01 | Wine grape | nucleus | 45.95 | 48.34 |
| CDX89866 | Canola | nucleus | 36.04 | 44.44 |
| Bra015266.1-P | Field mustard | nucleus | 36.04 | 43.72 |
| CDY18185 | Canola | nucleus | 35.14 | 43.33 |
| GSMUA_Achr9P11480_001 | Banana | nucleus | 43.69 | 42.92 |
| Solyc07g053740.1.1 | Tomato | nucleus | 43.24 | 42.67 |
| Solyc02g077840.1.1 | Tomato | nucleus | 28.38 | 40.91 |
| Solyc03g006320.1.1 | Tomato | nucleus, plastid | 39.19 | 40.28 |
| Os01t0797600-01 | Rice | nucleus, plastid | 42.34 | 40.0 |
| Solyc12g005960.1.1 | Tomato | nucleus | 34.68 | 39.9 |
| GSMUA_Achr4P23620_001 | Banana | nucleus | 40.09 | 39.73 |
| Zm00001d043205_P001 | Maize | nucleus | 41.89 | 39.24 |
| TraesCS3B01G357500.1 | Wheat | nucleus, plastid | 42.79 | 39.09 |
| HORVU0Hr1G007050.2 | Barley | nucleus, plastid | 42.34 | 39.0 |
| HORVU3Hr1G078150.2 | Barley | nucleus, plastid | 42.34 | 39.0 |
| Solyc07g049490.1.1 | Tomato | nucleus | 34.68 | 38.89 |
| GSMUA_Achr8P03550_001 | Banana | nucleus | 37.84 | 38.89 |
| Zm00001d000339_P001 | Maize | nucleus | 40.54 | 38.63 |
| TraesCS3D01G321500.1 | Wheat | nucleus | 42.79 | 38.62 |
| TraesCS1D01G314800.1 | Wheat | nucleus | 40.99 | 38.56 |
| TraesCS3A01G328000.1 | Wheat | nucleus | 42.79 | 38.46 |
| OQU87713 | Sorghum | nucleus, plastid | 41.89 | 38.43 |
| Os05t0497300-01 | Rice | nucleus | 40.54 | 38.14 |
| TraesCS1A01G314300.1 | Wheat | nucleus | 40.54 | 38.14 |
| GSMUA_Achr6P00250_001 | Banana | nucleus | 40.99 | 38.08 |
| Zm00001d012585_P001 | Maize | nucleus | 40.99 | 37.76 |
| Zm00001d038585_P001 | Maize | mitochondrion, nucleus | 37.39 | 37.73 |
| TraesCS1B01G326600.1 | Wheat | nucleus | 40.54 | 37.5 |
| EES19749 | Sorghum | nucleus, plastid | 41.89 | 36.19 |
| KRH45546 | Soybean | nucleus | 29.28 | 36.11 |
| Solyc10g006130.1.1 | Tomato | mitochondrion, nucleus | 33.78 | 33.94 |
| GSMUA_Achr10P... | Banana | nucleus | 33.78 | 33.78 |
| GSMUA_Achr4P33270_001 | Banana | nucleus | 38.74 | 32.33 |
| Solyc07g064890.1.1 | Tomato | nucleus | 33.33 | 30.83 |
| Solyc04g072300.1.1 | Tomato | mitochondrion, nucleus | 20.27 | 28.12 |
| Solyc11g045680.1.1 | Tomato | nucleus, plastid | 22.07 | 16.84 |
| Solyc11g045690.1.1 | Tomato | nucleus, plastid | 21.62 | 15.89 |
| Solyc01g067540.1.1 | Tomato | nucleus | 22.52 | 15.58 |
| Solyc05g013540.1.1 | Tomato | nucleus | 27.03 | 15.54 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ncoils:Coil | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| UniProt:K4CY87 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31677 | PANTHER:PTHR31677:SF19 |
| SMART:SM00380 | SUPFAM:SSF54171 | EnsemblPlantsGene:Solyc10g009110.1 | EnsemblPlants:Solyc10g009110.1.1 | UniParc:UPI0001D64C37 | SEG:seg |
Description
No Description!
Coordinates
chr10:+:3130028..3130696
Molecular Weight (calculated)
24240.7 Da
IEP (calculated)
9.288
GRAVY (calculated)
-0.474
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPKEKIGAV TAMAMVNLNG ISKEVHYRGV RKRPWGRYAA EIRDPGKKSR VWLGTFDTAE EAARAYDNAA REFRGAKAKT NFPKLEMEKE EDLKFAVKNE
101: INRSPSQTST VESSSPVMVD SSSPLDLSLC GSIGGFNHHT VKFPSSGGGF TGSVQAVNHM YYIEALARAG VIKLETNRKK TVDYLGGGDS DSSTVIDFMR
201: VDVKSTTAGL NLDLNFPPPE NM
101: INRSPSQTST VESSSPVMVD SSSPLDLSLC GSIGGFNHHT VKFPSSGGGF TGSVQAVNHM YYIEALARAG VIKLETNRKK TVDYLGGGDS DSSTVIDFMR
201: VDVKSTTAGL NLDLNFPPPE NM
001: MAKMGLKPDP ATTNQTHNNA KEIRYRGVRK RPWGRYAAEI RDPGKKTRVW LGTFDTAEEA ARAYDTAARD FRGAKAKTNF PTFLELSDQK VPTGFARSPS
101: QSSTLDCASP PTLVVPSATA GNVPPQLELS LGGGGGGSCY QIPMSRPVYF LDLMGIGNVG RGQPPPVTSA FRSPVVHVAT KMACGAQSDS DSSSVVDFEG
201: GMEKRSQLLD LDLNLPPPSE QA
101: QSSTLDCASP PTLVVPSATA GNVPPQLELS LGGGGGGSCY QIPMSRPVYF LDLMGIGNVG RGQPPPVTSA FRSPVVHVAT KMACGAQSDS DSSSVVDFEG
201: GMEKRSQLLD LDLNLPPPSE QA
Arabidopsis Description
ERF4Ethylene-responsive transcription factor 4 [Source:UniProtKB/Swiss-Prot;Acc:O80340]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.