Factsheet for GSMUA_Achr10P09150_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P00350_001	Banana	nucleus	26.13	52.73
GSMUA_Achr9P11480_001	Banana	nucleus	48.2	47.35
GSMUA_Achr4P23620_001	Banana	nucleus	45.05	44.64
GSMUA_Achr7P03640_001	Banana	nucleus	33.33	44.58
GSMUA_Achr8P03550_001	Banana	nucleus	41.44	42.59
GSMUA_AchrUn_...	Banana	nucleus	20.72	42.59
GSMUA_Achr3P13010_001	Banana	nucleus	29.28	42.48
GSMUA_Achr8P33590_001	Banana	nucleus	35.14	41.71
GSMUA_Achr8P15830_001	Banana	nucleus	37.39	41.71
GSMUA_Achr8P06870_001	Banana	nucleus	34.68	41.62
GSMUA_Achr6P00250_001	Banana	nucleus	44.14	41.0
Os01t0797600-01	Rice	nucleus, plastid	41.89	39.57
VIT_12s0028g03270.t01	Wine grape	nucleus	37.39	39.34
Zm00001d038585_P001	Maize	mitochondrion, nucleus	38.74	39.09
Os05t0497300-01	Rice	nucleus	41.44	38.98
EES19749	Sorghum	nucleus, plastid	44.59	38.52
Zm00001d000339_P001	Maize	nucleus	40.09	38.2
TraesCS1D01G314800.1	Wheat	nucleus	40.54	38.14
Zm00001d043205_P001	Maize	nucleus	40.54	37.97
Solyc07g053740.1.1	Tomato	nucleus	38.29	37.78
TraesCS1A01G314300.1	Wheat	nucleus	40.09	37.71
PGSC0003DMT400068959	Potato	nucleus	37.84	37.5
TraesCS3B01G357500.1	Wheat	nucleus, plastid	40.99	37.45
HORVU3Hr1G078150.2	Barley	nucleus, plastid	40.54	37.34
HORVU0Hr1G007050.2	Barley	nucleus, plastid	40.54	37.34
GSMUA_AchrUn_...	Banana	nucleus	29.73	37.29
TraesCS3A01G328000.1	Wheat	nucleus	41.44	37.25
TraesCS1B01G326600.1	Wheat	nucleus	40.09	37.08
TraesCS3D01G321500.1	Wheat	nucleus	40.99	36.99
GSMUA_Achr4P06170_001	Banana	nucleus	30.63	36.76
CDX89866	Canola	nucleus	29.73	36.67
OQU87713	Sorghum	nucleus, plastid	39.64	36.36
GSMUA_Achr4P33270_001	Banana	nucleus	43.24	36.09
Bra015266.1-P	Field mustard	nucleus	29.73	36.07
GSMUA_Achr1P25890_001	Banana	nucleus	25.68	35.85
GSMUA_Achr4P04060_001	Banana	mitochondrion	25.23	35.44
GSMUA_Achr5P26850_001	Banana	nucleus	30.18	35.08
CDY18185	Canola	nucleus	27.93	34.44
Zm00001d012585_P001	Maize	nucleus	37.39	34.44
Solyc10g009110.1.1	Tomato	nucleus	33.78	33.78
GSMUA_Achr3P23710_001	Banana	nucleus	30.18	33.17
GSMUA_Achr1P18230_001	Banana	nucleus	28.38	33.16
Solyc03g006320.1.1	Tomato	nucleus, plastid	31.98	32.87
PGSC0003DMT400058751	Potato	nucleus	33.33	32.74
GSMUA_Achr8P15820_001	Banana	nucleus	24.77	32.35
GSMUA_Achr6P01440_001	Banana	nucleus	27.03	32.26
PGSC0003DMT400033391	Potato	nucleus	33.33	32.17
GSMUA_Achr6P00240_001	Banana	nucleus	24.32	31.4
GSMUA_Achr3P29290_001	Banana	nucleus	21.62	30.19
GSMUA_Achr4P11430_001	Banana	nucleus	22.07	29.88
GSMUA_Achr6P35320_001	Banana	nucleus	18.92	29.37
GSMUA_Achr4P06660_001	Banana	nucleus	25.23	29.17
PGSC0003DMT400035731	Potato	nucleus	36.04	26.94
GSMUA_Achr7P17910_001	Banana	nucleus	19.37	26.54
GSMUA_Achr5P09940_001	Banana	mitochondrion	28.38	26.47
GSMUA_Achr3P19420_001	Banana	nucleus	29.73	23.24
GSMUA_Achr10P...	Banana	nucleus	21.17	18.01
GSMUA_Achr8P30180_001	Banana	nucleus	24.77	17.63
GSMUA_Achr9P01870_001	Banana	nucleus	22.52	17.36
GSMUA_AchrUn_...	Banana	nucleus	21.62	17.14
GSMUA_Achr3P02360_001	Banana	nucleus	20.27	16.73

Protein Annotations

Gene3D:3.30.730.10	MapMan:35.2	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr10G09150_001	EnsemblPlants:GSMUA_Achr10P09150_001
EnsemblPlants:GSMUA_Achr10T09150_001	InterPro:IPR001471	InterPro:IPR036955	UniProt:M0RGP1	PFAM:PF00847	PIRSF:PIRSF038123
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31677	PANTHER:PTHR31677:SF19	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI000294D225	SEG:seg	:	:	:	:

Description

Putative AP2 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G09150_001]

Coordinates

chr10:-:19112006..19112989

Molecular Weight (calculated)

23647.5 Da

IEP (calculated)

8.245

GRAVY (calculated)

-0.456

Length

222 amino acids

Sequence
(BLAST)

001: MAPRGKATTV GDGEGKEAHF RGVRKRPWGR YAAEIRDPNK KSRIWLGTFG TAEEAARAYD AAARDSSSQS STVENSGSSE AAAAAAMPSL PAPLPPSPDI
101: NLVYRGQGGA RFPFQPYSPV IQAAQPFFFL NTVARSENFP TSDASMTAYH RQLPLCQPTI IACWHPPPAV TVAAVTATQS DSDSSSVVDR HPDHRSPPSP
201: SASPKSFALH LDLNLPPPLD TA

Best Arabidopsis Sequence Match ( AT5G44210.1 )
(BLAST)

001: MAPRQANGRS IAVSEGGGGK TMTMTTMRKE VHFRGVRKRP WGRYAAEIRD PGKKTRVWLG TFDTAEEAAR AYDTAAREFR GSKAKTNFPL PGESTTVNDG
101: GENDSYVNRT TVTTAREMTR QRFPFACHRE RKVVGGYASA GFFFDPSRAA SLRAELSRVC PVRFDPVNIE LSIGIRETVK VEPRRELNLD LNLAPPVVDV

Arabidopsis Description

ERF9Ethylene-responsive transcription factor 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE67]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.