Factsheet for GSMUA_Achr4P06660_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	plastid
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0141g00690.t01	Wine grape	nucleus	48.96	55.95
GSMUA_Achr7P00350_001	Banana	nucleus	31.25	54.55
GSMUA_AchrUn_...	Banana	nucleus	30.21	53.7
GSMUA_Achr6P01440_001	Banana	nucleus	46.35	47.85
GSMUA_Achr3P29290_001	Banana	nucleus	38.02	45.91
GSMUA_Achr3P13010_001	Banana	nucleus	34.38	43.14
GSMUA_Achr5P09940_001	Banana	mitochondrion	48.44	39.08
KRH67315	Soybean	nucleus	33.85	37.79
GSMUA_Achr7P03640_001	Banana	nucleus	32.29	37.35
GSMUA_Achr4P04060_001	Banana	mitochondrion	30.73	37.34
GSMUA_Achr4P11430_001	Banana	nucleus	31.77	37.2
GSMUA_Achr8P06870_001	Banana	nucleus	34.9	36.22
GSMUA_Achr8P15830_001	Banana	nucleus	37.5	36.18
GSMUA_Achr8P15820_001	Banana	nucleus	31.77	35.88
GSMUA_Achr1P25890_001	Banana	nucleus	29.69	35.85
GSMUA_Achr4P06170_001	Banana	nucleus	34.38	35.68
GSMUA_Achr5P26850_001	Banana	nucleus	35.42	35.6
GSMUA_Achr1P18230_001	Banana	nucleus	34.9	35.26
GSMUA_Achr8P33590_001	Banana	nucleus	33.33	34.22
GSMUA_Achr6P00240_001	Banana	nucleus	30.21	33.72
GSMUA_AchrUn_...	Banana	nucleus	30.73	33.33
GSMUA_Achr6P35320_001	Banana	nucleus	23.44	31.47
GSMUA_Achr3P23710_001	Banana	nucleus	32.81	31.19
GSMUA_Achr9P11480_001	Banana	nucleus	35.42	30.09
GSMUA_Achr4P23620_001	Banana	nucleus	34.38	29.46
GSMUA_Achr6P00250_001	Banana	nucleus	35.42	28.45
GSMUA_Achr8P03550_001	Banana	nucleus	31.77	28.24
GSMUA_Achr7P17910_001	Banana	nucleus	22.4	26.54
GSMUA_Achr10P...	Banana	nucleus	29.17	25.23
GSMUA_Achr4P33270_001	Banana	nucleus	33.33	24.06
GSMUA_Achr3P19420_001	Banana	nucleus	29.69	20.07
GSMUA_Achr3P02360_001	Banana	nucleus	27.08	19.33
GSMUA_Achr10P...	Banana	nucleus	25.52	18.77
GSMUA_Achr9P01870_001	Banana	nucleus	25.52	17.01
GSMUA_AchrUn_...	Banana	nucleus	23.96	16.43
GSMUA_Achr8P30180_001	Banana	nucleus	26.56	16.35

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr4G06660_001	EnsemblPlants:GSMUA_Achr4P06660_001	EnsemblPlants:GSMUA_Achr4T06660_001
InterPro:IPR001471	InterPro:IPR036955	UniProt:M0SLN3	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31677	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000295FDD4	SEG:seg	:

Description

AP2/ERF domain-containing transcription factor [Source:GMGC_GENE;Acc:GSMUA_Achr4G06660_001]

Coordinates

chr4:+:5000064..5000795

Molecular Weight (calculated)

20582.4 Da

IEP (calculated)

10.103

GRAVY (calculated)

-0.524

Length

192 amino acids

Sequence
(BLAST)

001: MALETLRLRK GGFAAAAAEN KGSTAVLGGE VTETHFRGVR KRPWGRFAAE IRDPWKKTRK WLGTFDTAEE AARAYDEAAR SLRGPKAKTN FGCPGDHGIQ
101: SSGPQISWGA VPRWRSALDG RDLTIGPPPA LAGGGSGCLG YRLGTVEVAT RGDQEMEKAL GAAMGRKVED EAEAAKQKQP FSFDLNLPAP LF

Best Arabidopsis Sequence Match ( AT1G50640.1 )
(BLAST)

001: MRRGRGSSAV AGPTVVAAIN GSVKEIRFRG VRKRPWGRFA AEIRDPWKKA RVWLGTFDSA EEAARAYDSA ARNLRGPKAK TNFPIDSSSP PPPNLRFNQI
101: RNQNQNQVDP FMDHRLFTDH QQQFPIVNRP TSSSMSSTVE SFSGPRPTTM KPATTKRYPR TPPVVPEDCH SDCDSSSSVI DDDDDIASSS RRRNPPFQFD
201: LNFPPLDCVD LFNGADDLHC TDLRL

Arabidopsis Description

ERF3Uncharacterized protein At1g50640 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV01]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.