Factsheet for GSMUA_Achr3P29290_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	nucleus	40.88	60.19
GSMUA_Achr7P00350_001	Banana	nucleus	37.74	54.55
KRH67315	Soybean	nucleus	52.2	48.26
VIT_07s0141g00690.t01	Wine grape	nucleus	44.03	41.67
GSMUA_Achr3P13010_001	Banana	nucleus	37.74	39.22
GSMUA_Achr4P06660_001	Banana	nucleus	45.91	38.02
GSMUA_Achr4P11430_001	Banana	nucleus	38.99	37.8
GSMUA_Achr6P01440_001	Banana	nucleus	44.03	37.63
GSMUA_Achr4P04060_001	Banana	mitochondrion	37.11	37.34
GSMUA_Achr1P18230_001	Banana	nucleus	42.77	35.79
GSMUA_Achr4P06170_001	Banana	nucleus	41.51	35.68
GSMUA_Achr6P00240_001	Banana	nucleus	37.74	34.88
GSMUA_Achr7P03640_001	Banana	nucleus	35.22	33.73
GSMUA_Achr8P06870_001	Banana	nucleus	38.36	32.97
GSMUA_Achr8P15820_001	Banana	nucleus	34.59	32.35
GSMUA_Achr1P25890_001	Banana	nucleus	32.08	32.08
GSMUA_Achr8P33590_001	Banana	nucleus	37.11	31.55
GSMUA_Achr3P23710_001	Banana	nucleus	39.62	31.19
GSMUA_Achr5P26850_001	Banana	nucleus	36.48	30.37
GSMUA_Achr8P15830_001	Banana	nucleus	37.74	30.15
GSMUA_AchrUn_...	Banana	nucleus	33.33	29.94
GSMUA_Achr5P09940_001	Banana	mitochondrion	44.65	29.83
GSMUA_Achr6P35320_001	Banana	nucleus	25.79	28.67
GSMUA_Achr8P03550_001	Banana	nucleus	38.36	28.24
GSMUA_Achr9P11480_001	Banana	nucleus	36.48	25.66
GSMUA_Achr6P00250_001	Banana	nucleus	38.36	25.52
GSMUA_Achr4P23620_001	Banana	nucleus	35.85	25.45
GSMUA_Achr7P17910_001	Banana	nucleus	25.16	24.69
GSMUA_Achr4P33270_001	Banana	nucleus	37.74	22.56
GSMUA_Achr10P...	Banana	nucleus	30.19	21.62
GSMUA_Achr3P19420_001	Banana	nucleus	32.7	18.31
GSMUA_Achr3P02360_001	Banana	nucleus	30.82	18.22
GSMUA_Achr10P...	Banana	nucleus	29.56	18.01
GSMUA_AchrUn_...	Banana	nucleus	29.56	16.79
GSMUA_Achr9P01870_001	Banana	nucleus	29.56	16.32
GSMUA_Achr8P30180_001	Banana	nucleus	30.19	15.38

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr3G29290_001	EnsemblPlants:GSMUA_Achr3P29290_001
EnsemblPlants:GSMUA_Achr3T29290_001	InterPro:IPR001471	InterPro:IPR036955	UniProt:M0SIU5	PFAM:PF00847	PIRSF:PIRSF038123
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31677	PANTHER:PTHR31677:SF17	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI000295F527	SEG:seg	:	:	:	:

Description

Putative Ethylene-responsive transcription factor 9 [Source:GMGC_GENE;Acc:GSMUA_Achr3G29290_001]

Coordinates

chr3:+:28488240..28488719

Molecular Weight (calculated)

16934.8 Da

IEP (calculated)

10.289

GRAVY (calculated)

-0.560

Length

159 amino acids

Sequence
(BLAST)

001: MAAAAQGGGG GREAHFRGVR KRPWGRFAAE IRDPWKKTRK WLGTFDTAEE AARAYDEAAR SLRGPKAKTN FGCPGDLGVP PSAAQVSWGA VTRWRSAADL
101: SMGHTPAAAG GGSGYAGYRL EVVEAAAREE QERKTVAAAE AGKEKPPFSF DLNLPAPFF

Best Arabidopsis Sequence Match ( AT1G28360.1 )
(BLAST)

001: MASTTCAREV HYRGVRKRPW GRYAAEIRDP WKKTRVWLGT FDTPEEAALA YDGAARFLRG IKAKTNFPSP LSLDLNHLPS APSAATAAAN NQPHQHQQLW
101: FAAPPPVPPS SDHHHQHHRI FLRTGVLNDK TSDYSSTEAP LYFTSSPNTA TSSPGYQVVG FPMMNSSPSP VTVRRGLAID LNEPPPLWL

Arabidopsis Description

ERF12Ethylene-responsive transcription factor 12 [Source:UniProtKB/Swiss-Prot;Acc:Q94ID6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.