Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P00350_001 | Banana | nucleus | 33.87 | 57.27 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.65 | 52.78 |
| GSMUA_Achr5P09940_001 | Banana | mitochondrion | 63.98 | 50.0 |
| GSMUA_Achr4P06660_001 | Banana | nucleus | 47.85 | 46.35 |
| GSMUA_Achr3P29290_001 | Banana | nucleus | 37.63 | 44.03 |
| GSMUA_Achr3P13010_001 | Banana | nucleus | 34.41 | 41.83 |
| VIT_14s0081g00520.t01 | Wine grape | nucleus | 37.1 | 40.35 |
| GSMUA_Achr7P03640_001 | Banana | nucleus | 34.95 | 39.16 |
| KRH67315 | Soybean | nucleus | 36.02 | 38.95 |
| GSMUA_Achr4P04060_001 | Banana | mitochondrion | 31.72 | 37.34 |
| GSMUA_Achr6P00240_001 | Banana | nucleus | 32.8 | 35.47 |
| GSMUA_Achr8P15820_001 | Banana | nucleus | 31.72 | 34.71 |
| GSMUA_Achr4P06170_001 | Banana | nucleus | 34.41 | 34.59 |
| GSMUA_Achr8P06870_001 | Banana | nucleus | 34.41 | 34.59 |
| GSMUA_Achr8P33590_001 | Banana | nucleus | 34.41 | 34.22 |
| GSMUA_Achr1P18230_001 | Banana | nucleus | 34.95 | 34.21 |
| GSMUA_Achr5P26850_001 | Banana | nucleus | 34.95 | 34.03 |
| GSMUA_Achr8P15830_001 | Banana | nucleus | 36.02 | 33.67 |
| GSMUA_Achr4P11430_001 | Banana | nucleus | 29.57 | 33.54 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.72 | 33.33 |
| GSMUA_Achr1P25890_001 | Banana | nucleus | 28.49 | 33.33 |
| GSMUA_Achr3P23710_001 | Banana | nucleus | 36.02 | 33.17 |
| GSMUA_Achr6P35320_001 | Banana | nucleus | 23.66 | 30.77 |
| GSMUA_Achr4P23620_001 | Banana | nucleus | 36.56 | 30.36 |
| GSMUA_Achr8P03550_001 | Banana | nucleus | 34.95 | 30.09 |
| GSMUA_Achr9P11480_001 | Banana | nucleus | 36.56 | 30.09 |
| GSMUA_Achr6P00250_001 | Banana | nucleus | 37.63 | 29.29 |
| GSMUA_Achr7P17910_001 | Banana | nucleus | 24.73 | 28.4 |
| GSMUA_Achr10P... | Banana | nucleus | 32.26 | 27.03 |
| GSMUA_Achr4P33270_001 | Banana | nucleus | 36.02 | 25.19 |
| GSMUA_Achr10P... | Banana | nucleus | 29.03 | 20.69 |
| GSMUA_Achr3P19420_001 | Banana | nucleus | 30.65 | 20.07 |
| GSMUA_Achr3P02360_001 | Banana | nucleus | 28.49 | 19.7 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.96 | 18.57 |
| GSMUA_Achr9P01870_001 | Banana | nucleus | 27.96 | 18.06 |
| GSMUA_Achr8P30180_001 | Banana | nucleus | 29.57 | 17.63 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr6G01440_001 | EnsemblPlants:GSMUA_Achr6P01440_001 | EnsemblPlants:GSMUA_Achr6T01440_001 |
| InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M0T392 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31677 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000295732C | SEG:seg | : |
Description
Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G01440_001]
Coordinates
chr6:+:944978..945538
Molecular Weight (calculated)
20322.3 Da
IEP (calculated)
10.296
GRAVY (calculated)
-0.417
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MMAVETLRLR KEGLGPPAAA AVAGGEKEAH FRGVRKRPWG RFAAEIRDPW KKTRKWLGTF DTAEEAALAY DAAARTLRGS KAKTNFGYSA ADVEIVPAAV
101: PEPQIGWLSS SPWRSGFREP ATALNGRDLF LGQPGLAVES GSEFSGYRFE AVKMVVKGEQ ERRGTVAEGK KKPPFCFDLN LPPPFV
101: PEPQIGWLSS SPWRSGFREP ATALNGRDLF LGQPGLAVES GSEFSGYRFE AVKMVVKGEQ ERRGTVAEGK KKPPFCFDLN LPPPFV
001: MRRGRGSSAV AGPTVVAAIN GSVKEIRFRG VRKRPWGRFA AEIRDPWKKA RVWLGTFDSA EEAARAYDSA ARNLRGPKAK TNFPIDSSSP PPPNLRFNQI
101: RNQNQNQVDP FMDHRLFTDH QQQFPIVNRP TSSSMSSTVE SFSGPRPTTM KPATTKRYPR TPPVVPEDCH SDCDSSSSVI DDDDDIASSS RRRNPPFQFD
201: LNFPPLDCVD LFNGADDLHC TDLRL
101: RNQNQNQVDP FMDHRLFTDH QQQFPIVNRP TSSSMSSTVE SFSGPRPTTM KPATTKRYPR TPPVVPEDCH SDCDSSSSVI DDDDDIASSS RRRNPPFQFD
201: LNFPPLDCVD LFNGADDLHC TDLRL
Arabidopsis Description
ERF3Uncharacterized protein At1g50640 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV01]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.