Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g077840.1.1 | Tomato | nucleus | 53.49 | 59.74 |
| VIT_10s0003g00130.t01 | Wine grape | nucleus | 52.33 | 59.21 |
| PGSC0003DMT400076408 | Potato | nucleus | 52.33 | 58.82 |
| KRH21385 | Soybean | nucleus | 50.0 | 52.76 |
| GSMUA_Achr7P00350_001 | Banana | nucleus | 33.72 | 52.73 |
| KRH10926 | Soybean | nucleus | 49.42 | 49.42 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.07 | 46.3 |
| GSMUA_Achr8P15820_001 | Banana | nucleus | 43.02 | 43.53 |
| GSMUA_AchrUn_... | Banana | nucleus | 39.53 | 38.42 |
| GSMUA_Achr3P29290_001 | Banana | nucleus | 34.88 | 37.74 |
| GSMUA_Achr7P03640_001 | Banana | nucleus | 36.05 | 37.35 |
| GSMUA_Achr3P13010_001 | Banana | nucleus | 33.14 | 37.25 |
| GSMUA_Achr1P25890_001 | Banana | nucleus | 33.72 | 36.48 |
| GSMUA_Achr8P33590_001 | Banana | nucleus | 36.63 | 33.69 |
| GSMUA_Achr4P04060_001 | Banana | mitochondrion | 30.81 | 33.54 |
| GSMUA_Achr4P11430_001 | Banana | nucleus | 31.4 | 32.93 |
| GSMUA_Achr6P35320_001 | Banana | nucleus | 27.33 | 32.87 |
| GSMUA_Achr6P01440_001 | Banana | nucleus | 35.47 | 32.8 |
| GSMUA_Achr8P06870_001 | Banana | nucleus | 33.72 | 31.35 |
| GSMUA_Achr4P06170_001 | Banana | nucleus | 33.72 | 31.35 |
| GSMUA_Achr1P18230_001 | Banana | nucleus | 34.3 | 31.05 |
| GSMUA_Achr4P06660_001 | Banana | nucleus | 33.72 | 30.21 |
| GSMUA_Achr5P26850_001 | Banana | nucleus | 33.14 | 29.84 |
| GSMUA_Achr8P15830_001 | Banana | nucleus | 33.72 | 29.15 |
| GSMUA_Achr7P17910_001 | Banana | nucleus | 27.33 | 29.01 |
| GSMUA_Achr8P03550_001 | Banana | nucleus | 35.47 | 28.24 |
| GSMUA_Achr3P23710_001 | Banana | nucleus | 33.14 | 28.22 |
| GSMUA_Achr4P23620_001 | Banana | nucleus | 36.63 | 28.12 |
| GSMUA_Achr5P09940_001 | Banana | mitochondrion | 37.21 | 26.89 |
| GSMUA_Achr6P00250_001 | Banana | nucleus | 37.21 | 26.78 |
| GSMUA_Achr9P11480_001 | Banana | nucleus | 34.88 | 26.55 |
| GSMUA_Achr10P... | Banana | nucleus | 31.4 | 24.32 |
| GSMUA_Achr4P33270_001 | Banana | nucleus | 33.14 | 21.43 |
| GSMUA_Achr10P... | Banana | nucleus | 30.81 | 20.31 |
| GSMUA_Achr3P02360_001 | Banana | nucleus | 31.4 | 20.07 |
| GSMUA_Achr3P19420_001 | Banana | nucleus | 32.56 | 19.72 |
| GSMUA_AchrUn_... | Banana | nucleus | 26.74 | 16.43 |
| GSMUA_Achr9P01870_001 | Banana | nucleus | 27.33 | 16.32 |
| GSMUA_Achr8P30180_001 | Banana | nucleus | 27.91 | 15.38 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr6G00240_001 | EnsemblPlants:GSMUA_Achr6P00240_001 |
| EnsemblPlants:GSMUA_Achr6T00240_001 | InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M0T2X2 | PFAM:PF00847 | PIRSF:PIRSF038123 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000295E203 |
| SEG:seg | : | : | : | : | : |
Description
Putative ethylene responsive element binding protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G00240_001]
Coordinates
chr6:+:179683..180201
Molecular Weight (calculated)
18533.9 Da
IEP (calculated)
9.499
GRAVY (calculated)
-0.474
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSRGDGHHY RGVRKRPWGR YAAEIRDPWK KTRVWLGTFD TPEEAALAYD RAARSLRGAK AKTNFPYHHT SAPPPLHLPP SATLDLNLPC HCWLVPAPPQ
101: AVPPSPPPPP STALVLGSFA LYDPAKTPSP EARNAAAPDT PASSSASLFR DVGRDLLLDL NEPPPASSLL IG
101: AVPPSPPPPP STALVLGSFA LYDPAKTPSP EARNAAAPDT PASSSASLFR DVGRDLLLDL NEPPPASSLL IG
001: MASTTCAREV HYRGVRKRPW GRYAAEIRDP WKKTRVWLGT FDTPEEAALA YDGAARFLRG IKAKTNFPSP LSLDLNHLPS APSAATAAAN NQPHQHQQLW
101: FAAPPPVPPS SDHHHQHHRI FLRTGVLNDK TSDYSSTEAP LYFTSSPNTA TSSPGYQVVG FPMMNSSPSP VTVRRGLAID LNEPPPLWL
101: FAAPPPVPPS SDHHHQHHRI FLRTGVLNDK TSDYSSTEAP LYFTSSPNTA TSSPGYQVVG FPMMNSSPSP VTVRRGLAID LNEPPPLWL
Arabidopsis Description
ERF12Ethylene-responsive transcription factor 12 [Source:UniProtKB/Swiss-Prot;Acc:Q94ID6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.