Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P00350_001 | Banana | nucleus | 33.51 | 58.18 |
| GSMUA_Achr8P06870_001 | Banana | nucleus | 47.12 | 48.65 |
| Bra030095.1-P | Field mustard | nucleus | 40.84 | 46.43 |
| GSMUA_AchrUn_... | Banana | nucleus | 26.18 | 46.3 |
| CDY15673 | Canola | nucleus | 40.31 | 45.83 |
| Bra010880.1-P | Field mustard | nucleus | 40.84 | 45.35 |
| CDX90146 | Canola | nucleus | 40.84 | 45.35 |
| CDY70796 | Canola | nucleus | 38.22 | 45.34 |
| CDY70175 | Canola | nucleus | 39.79 | 45.24 |
| CDY34104 | Canola | nucleus | 38.22 | 45.06 |
| Bra032901.1-P | Field mustard | nucleus | 38.22 | 45.06 |
| KRH26242 | Soybean | nucleus | 30.37 | 44.96 |
| CDY69368 | Canola | nucleus | 40.31 | 44.77 |
| GSMUA_Achr7P03640_001 | Banana | nucleus | 38.74 | 44.58 |
| GSMUA_Achr3P13010_001 | Banana | nucleus | 35.08 | 43.79 |
| GSMUA_AchrUn_... | Banana | nucleus | 40.31 | 43.5 |
| KRH55195 | Soybean | nucleus | 41.36 | 43.17 |
| Bra032900.1-P | Field mustard | nucleus | 35.08 | 42.41 |
| GSMUA_Achr8P33590_001 | Banana | nucleus | 39.79 | 40.64 |
| GSMUA_Achr3P23710_001 | Banana | nucleus | 42.93 | 40.59 |
| CDY34105 | Canola | nucleus | 33.51 | 40.51 |
| KRH22040 | Soybean | nucleus | 40.31 | 39.9 |
| KRH27281 | Soybean | nucleus | 40.31 | 39.9 |
| GSMUA_Achr4P04060_001 | Banana | mitochondrion | 32.98 | 39.87 |
| GSMUA_Achr4P11430_001 | Banana | nucleus | 34.03 | 39.63 |
| GSMUA_Achr8P15830_001 | Banana | nucleus | 40.84 | 39.2 |
| VIT_19s0014g02240.t01 | Wine grape | nucleus | 44.5 | 38.64 |
| GSMUA_Achr9P11480_001 | Banana | nucleus | 45.03 | 38.05 |
| GSMUA_Achr1P25890_001 | Banana | nucleus | 31.41 | 37.74 |
| GSMUA_Achr4P06170_001 | Banana | nucleus | 35.6 | 36.76 |
| GSMUA_Achr4P23620_001 | Banana | nucleus | 42.93 | 36.61 |
| GSMUA_Achr3P29290_001 | Banana | nucleus | 30.37 | 36.48 |
| GSMUA_Achr6P00250_001 | Banana | nucleus | 45.55 | 36.4 |
| GSMUA_Achr1P18230_001 | Banana | nucleus | 36.13 | 36.32 |
| CDY61906 | Canola | cytosol | 25.65 | 36.3 |
| AT1G28370.2 | Thale cress | mitochondrion, nucleus, plastid | 38.22 | 35.78 |
| GSMUA_Achr8P03550_001 | Banana | nucleus | 40.31 | 35.65 |
| GSMUA_Achr4P06660_001 | Banana | nucleus | 35.6 | 35.42 |
| GSMUA_Achr6P01440_001 | Banana | nucleus | 34.03 | 34.95 |
| GSMUA_Achr6P35320_001 | Banana | nucleus | 25.13 | 33.57 |
| GSMUA_Achr6P00240_001 | Banana | nucleus | 29.84 | 33.14 |
| GSMUA_Achr8P15820_001 | Banana | nucleus | 29.32 | 32.94 |
| GSMUA_Achr10P... | Banana | nucleus | 35.08 | 30.18 |
| GSMUA_Achr4P33270_001 | Banana | nucleus | 40.84 | 29.32 |
| GSMUA_Achr7P17910_001 | Banana | nucleus | 24.61 | 29.01 |
| GSMUA_Achr5P09940_001 | Banana | mitochondrion | 35.6 | 28.57 |
| GSMUA_Achr3P19420_001 | Banana | nucleus | 33.51 | 22.54 |
| GSMUA_Achr10P... | Banana | nucleus | 28.27 | 20.69 |
| GSMUA_Achr8P30180_001 | Banana | nucleus | 31.94 | 19.55 |
| GSMUA_Achr3P02360_001 | Banana | nucleus | 27.23 | 19.33 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.75 | 18.93 |
| GSMUA_Achr9P01870_001 | Banana | nucleus | 25.13 | 16.67 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr5G26850_001 | EnsemblPlants:GSMUA_Achr5P26850_001 |
| EnsemblPlants:GSMUA_Achr5T26850_001 | InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M0T210 | PFAM:PF00847 | PIRSF:PIRSF038123 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31677 | PANTHER:PTHR31677:SF17 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0002955C2F | SEG:seg | : | : | : | : |
Description
Putative AP2/ERF domain-containing transcription factor [Source:GMGC_GENE;Acc:GSMUA_Achr5G26850_001]
Coordinates
chr5:-:27534451..27535026
Molecular Weight (calculated)
20435.0 Da
IEP (calculated)
10.272
GRAVY (calculated)
-0.335
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPSAARGEL RETRFRGVRK RRWGRFAAEI RDPAKRSRVW LGTFDTAEEA ARAYDAAALR FRGTKAKTNF AYPGPLYAPV VAGSVPSSPS NSNAESSTPS
101: PKAGAVTALL PLDLELGHAS ARFSFPHRPA SSAREATVSH HCLALDRAAA LTGMSVCDRL QSASDSVSPA EPTMRLPFDV DLNLSPPSEV V
101: PKAGAVTALL PLDLELGHAS ARFSFPHRPA SSAREATVSH HCLALDRAAA LTGMSVCDRL QSASDSVSPA EPTMRLPFDV DLNLSPPSEV V
001: MAKMGLKPDP ATTNQTHNNA KEIRYRGVRK RPWGRYAAEI RDPGKKTRVW LGTFDTAEEA ARAYDTAARD FRGAKAKTNF PTFLELSDQK VPTGFARSPS
101: QSSTLDCASP PTLVVPSATA GNVPPQLELS LGGGGGGSCY QIPMSRPVYF LDLMGIGNVG RGQPPPVTSA FRSPVVHVAT KMACGAQSDS DSSSVVDFEG
201: GMEKRSQLLD LDLNLPPPSE QA
101: QSSTLDCASP PTLVVPSATA GNVPPQLELS LGGGGGGSCY QIPMSRPVYF LDLMGIGNVG RGQPPPVTSA FRSPVVHVAT KMACGAQSDS DSSSVVDFEG
201: GMEKRSQLLD LDLNLPPPSE QA
Arabidopsis Description
ERF4Ethylene-responsive transcription factor 4 [Source:UniProtKB/Swiss-Prot;Acc:O80340]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.