Factsheet for GSMUA_Achr1P25890_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	nucleus	66.67	59.89
GSMUA_Achr7P03640_001	Banana	nucleus	59.12	56.63
GSMUA_Achr8P33590_001	Banana	nucleus	64.78	55.08
GSMUA_Achr7P00350_001	Banana	nucleus	34.59	50.0
GSMUA_AchrUn_...	Banana	nucleus	32.7	48.15
KRH26242	Soybean	nucleus	31.45	38.76
Bra030095.1-P	Field mustard	nucleus	40.25	38.1
CDY15673	Canola	nucleus	40.25	38.1
CDY70175	Canola	nucleus	40.25	38.1
GSMUA_Achr4P04060_001	Banana	mitochondrion	37.74	37.97
Bra032900.1-P	Field mustard	nucleus	37.74	37.97
CDY69368	Canola	nucleus	40.88	37.79
CDX90146	Canola	nucleus	40.88	37.79
Bra010880.1-P	Field mustard	nucleus	40.88	37.79
CDY70796	Canola	nucleus	37.74	37.27
KRH55195	Soybean	nucleus	42.77	37.16
CDY34104	Canola	nucleus	37.74	37.04
Bra032901.1-P	Field mustard	nucleus	37.74	37.04
GSMUA_Achr3P13010_001	Banana	nucleus	35.22	36.6
CDY34105	Canola	nucleus	35.85	36.08
KRH22040	Soybean	nucleus	42.77	35.23
KRH27281	Soybean	nucleus	42.14	34.72
GSMUA_Achr4P06170_001	Banana	nucleus	40.25	34.59
GSMUA_Achr8P06870_001	Banana	nucleus	40.25	34.59
GSMUA_Achr6P00240_001	Banana	nucleus	36.48	33.72
VIT_19s0014g02240.t01	Wine grape	nucleus	46.54	33.64
GSMUA_Achr8P15830_001	Banana	nucleus	41.51	33.17
GSMUA_Achr3P23710_001	Banana	nucleus	40.88	32.18
GSMUA_Achr3P29290_001	Banana	nucleus	32.08	32.08
GSMUA_Achr8P15820_001	Banana	nucleus	33.96	31.76
GSMUA_Achr4P11430_001	Banana	nucleus	32.7	31.71
GSMUA_Achr6P35320_001	Banana	nucleus	28.3	31.47
GSMUA_Achr5P26850_001	Banana	nucleus	37.74	31.41
AT1G28370.2	Thale cress	mitochondrion, nucleus, plastid	39.62	30.88
GSMUA_Achr4P06660_001	Banana	nucleus	35.85	29.69
GSMUA_Achr9P11480_001	Banana	nucleus	42.14	29.65
GSMUA_Achr6P00250_001	Banana	nucleus	44.03	29.29
GSMUA_Achr1P18230_001	Banana	nucleus	34.59	28.95
CDY61906	Canola	cytosol	24.53	28.89
GSMUA_Achr4P23620_001	Banana	nucleus	40.25	28.57
GSMUA_Achr6P01440_001	Banana	nucleus	33.33	28.49
GSMUA_Achr8P03550_001	Banana	nucleus	38.36	28.24
GSMUA_Achr7P17910_001	Banana	nucleus	28.3	27.78
GSMUA_Achr10P...	Banana	nucleus	35.85	25.68
GSMUA_Achr4P33270_001	Banana	nucleus	42.14	25.19
GSMUA_Achr5P09940_001	Banana	mitochondrion	37.11	24.79
GSMUA_Achr3P19420_001	Banana	nucleus	37.11	20.77
GSMUA_Achr10P...	Banana	nucleus	33.33	20.31
GSMUA_Achr3P02360_001	Banana	nucleus	33.96	20.07
GSMUA_AchrUn_...	Banana	nucleus	29.56	16.79
GSMUA_Achr9P01870_001	Banana	nucleus	29.56	16.32
GSMUA_Achr8P30180_001	Banana	nucleus	28.93	14.74

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr1G25890_001	EnsemblPlants:GSMUA_Achr1P25890_001
EnsemblPlants:GSMUA_Achr1T25890_001	InterPro:IPR001471	InterPro:IPR036955	UniProt:M0S346	PFAM:PF00847	PIRSF:PIRSF038123
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31677	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000294F29B
SEG:seg	:	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G25890_001]

Coordinates

chr1:-:20260017..20260609

Molecular Weight (calculated)

16232.3 Da

IEP (calculated)

11.089

GRAVY (calculated)

-0.360

Length

159 amino acids

Sequence
(BLAST)

001: MAPRVKASRT GDGCGGGGGC RGGGDGKGAS YRGVRKRPWG RYAAEIRDPA KKCRVWLGTF DTAEEAARAY DAAARRFRGP KAKTNFSCPP TTSAAGASAG
101: AASSSPSVST VESSTPPRRP SVRIPALDLG LPHPSARIPF AHCVPAAACP LRLGLVVGG

Best Arabidopsis Sequence Match ( AT5G44210.1 )
(BLAST)

001: MAPRQANGRS IAVSEGGGGK TMTMTTMRKE VHFRGVRKRP WGRYAAEIRD PGKKTRVWLG TFDTAEEAAR AYDTAAREFR GSKAKTNFPL PGESTTVNDG
101: GENDSYVNRT TVTTAREMTR QRFPFACHRE RKVVGGYASA GFFFDPSRAA SLRAELSRVC PVRFDPVNIE LSIGIRETVK VEPRRELNLD LNLAPPVVDV

Arabidopsis Description

ERF9Ethylene-responsive transcription factor 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE67]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.