Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr7P00350_001 | Banana | nucleus | 40.62 | 82.73 |
GSMUA_Achr6P00250_001 | Banana | nucleus | 70.54 | 66.11 |
GSMUA_Achr9P11480_001 | Banana | nucleus | 53.12 | 52.65 |
GSMUA_Achr8P06870_001 | Banana | nucleus | 40.62 | 49.19 |
GSMUA_Achr8P15830_001 | Banana | nucleus | 42.86 | 48.24 |
GSMUA_Achr7P03640_001 | Banana | nucleus | 34.82 | 46.99 |
GSMUA_AchrUn_... | Banana | nucleus | 22.32 | 46.3 |
PGSC0003DMT400068959 | Potato | nucleus | 45.54 | 45.54 |
GSMUA_Achr8P03550_001 | Banana | nucleus | 43.75 | 45.37 |
GSMUA_Achr10P... | Banana | nucleus | 44.64 | 45.05 |
Solyc07g053740.1.1 | Tomato | nucleus | 45.09 | 44.89 |
GSMUA_Achr3P13010_001 | Banana | nucleus | 30.36 | 44.44 |
GSMUA_Achr4P33270_001 | Banana | nucleus | 51.34 | 43.23 |
GSMUA_Achr5P26850_001 | Banana | nucleus | 36.61 | 42.93 |
GSMUA_Achr3P23710_001 | Banana | nucleus | 38.39 | 42.57 |
GSMUA_AchrUn_... | Banana | nucleus | 33.48 | 42.37 |
GSMUA_Achr8P33590_001 | Banana | nucleus | 34.82 | 41.71 |
CDX89866 | Canola | nucleus | 33.04 | 41.11 |
Bra015266.1-P | Field mustard | nucleus | 33.04 | 40.44 |
GSMUA_Achr1P25890_001 | Banana | nucleus | 28.57 | 40.25 |
Solyc10g009110.1.1 | Tomato | nucleus | 39.73 | 40.09 |
GSMUA_Achr4P04060_001 | Banana | mitochondrion | 28.12 | 39.87 |
CDY18185 | Canola | nucleus | 31.7 | 39.44 |
PGSC0003DMT400058751 | Potato | nucleus | 39.73 | 39.38 |
GSMUA_Achr4P06170_001 | Banana | nucleus | 31.25 | 37.84 |
GSMUA_Achr6P00240_001 | Banana | nucleus | 28.12 | 36.63 |
GSMUA_Achr6P01440_001 | Banana | nucleus | 30.36 | 36.56 |
GSMUA_Achr8P15820_001 | Banana | nucleus | 27.68 | 36.47 |
GSMUA_Achr3P29290_001 | Banana | nucleus | 25.45 | 35.85 |
GSMUA_Achr1P18230_001 | Banana | nucleus | 29.46 | 34.74 |
GSMUA_Achr4P06660_001 | Banana | nucleus | 29.46 | 34.38 |
Solyc03g006320.1.1 | Tomato | nucleus, plastid | 32.59 | 33.8 |
GSMUA_Achr4P11430_001 | Banana | nucleus | 24.55 | 33.54 |
PGSC0003DMT400035731 | Potato | nucleus | 42.86 | 32.32 |
GSMUA_Achr6P35320_001 | Banana | nucleus | 20.54 | 32.17 |
PGSC0003DMT400033391 | Potato | nucleus | 32.14 | 31.3 |
GSMUA_Achr5P09940_001 | Banana | mitochondrion | 32.14 | 30.25 |
GSMUA_Achr7P17910_001 | Banana | nucleus | 21.88 | 30.25 |
GSMUA_Achr3P19420_001 | Banana | nucleus | 32.59 | 25.7 |
GSMUA_Achr10P... | Banana | nucleus | 25.89 | 22.22 |
GSMUA_Achr3P02360_001 | Banana | nucleus | 25.45 | 21.19 |
GSMUA_Achr9P01870_001 | Banana | nucleus | 24.11 | 18.75 |
GSMUA_AchrUn_... | Banana | nucleus | 23.21 | 18.57 |
GSMUA_Achr8P30180_001 | Banana | nucleus | 25.0 | 17.95 |
Protein Annotations
MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr4G23620_001 | EnsemblPlants:GSMUA_Achr4P23620_001 | EnsemblPlants:GSMUA_Achr4T23620_001 |
InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M0SRH3 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
PANTHER:PTHR31677 | PANTHER:PTHR31677:SF42 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0002953AD1 | SEG:seg |
Description
Putative Ethylene-responsive transcription factor 4 [Source:GMGC_GENE;Acc:GSMUA_Achr4G23620_001]
Coordinates
chr4:-:23656489..23657238
Molecular Weight (calculated)
24413.9 Da
IEP (calculated)
9.894
GRAVY (calculated)
-0.507
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MATREKPAAG DEGGGKETHF RGVRKRPWGR YAAEIRDPGK KSRVWLGTYD TAEEAARAYD AAARQFRGSK ARTNFPRPDA CPQSSTVESS SREAAVPPLA
101: IPLPPSLDLD ILRRSGISGC ARFPFQPYPA VATPAMQPGH RYFLFDTIVR SEKAAAAAAI SRHHLLTLYP PTIVADLNSA IASGVQSDSD SSMVNLHRNH
201: RSSPPHRMLP LDLDLNLPPP PEIT
101: IPLPPSLDLD ILRRSGISGC ARFPFQPYPA VATPAMQPGH RYFLFDTIVR SEKAAAAAAI SRHHLLTLYP PTIVADLNSA IASGVQSDSD SSMVNLHRNH
201: RSSPPHRMLP LDLDLNLPPP PEIT
001: MAPRQANGRS IAVSEGGGGK TMTMTTMRKE VHFRGVRKRP WGRYAAEIRD PGKKTRVWLG TFDTAEEAAR AYDTAAREFR GSKAKTNFPL PGESTTVNDG
101: GENDSYVNRT TVTTAREMTR QRFPFACHRE RKVVGGYASA GFFFDPSRAA SLRAELSRVC PVRFDPVNIE LSIGIRETVK VEPRRELNLD LNLAPPVVDV
101: GENDSYVNRT TVTTAREMTR QRFPFACHRE RKVVGGYASA GFFFDPSRAA SLRAELSRVC PVRFDPVNIE LSIGIRETVK VEPRRELNLD LNLAPPVVDV
Arabidopsis Description
ERF9Ethylene-responsive transcription factor 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE67]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.