Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g006320.1.1 | Tomato | nucleus, plastid | 80.87 | 86.11 |
| KRH32582 | Soybean | nucleus | 23.48 | 59.34 |
| GSMUA_Achr7P00350_001 | Banana | nucleus | 26.52 | 55.45 |
| KRH21384 | Soybean | nucleus | 36.96 | 38.29 |
| KRH10927 | Soybean | nucleus | 36.09 | 37.9 |
| PGSC0003DMT400001820 | Potato | nucleus | 31.74 | 37.63 |
| PGSC0003DMT400076408 | Potato | nucleus | 24.78 | 37.25 |
| GSMUA_Achr9P11480_001 | Banana | nucleus | 36.52 | 37.17 |
| PGSC0003DMT400036071 | Potato | nucleus | 30.43 | 36.84 |
| VIT_10s0003g00140.t01 | Wine grape | nucleus | 36.09 | 36.56 |
| VIT_12s0028g03270.t01 | Wine grape | nucleus | 33.48 | 36.49 |
| PGSC0003DMT400058751 | Potato | nucleus | 35.65 | 36.28 |
| PGSC0003DMT400068959 | Potato | nucleus | 34.35 | 35.27 |
| Os01t0797600-01 | Rice | nucleus, plastid | 35.22 | 34.47 |
| TraesCS1D01G314800.1 | Wheat | nucleus | 35.22 | 34.32 |
| TraesCS3B01G357500.1 | Wheat | nucleus, plastid | 36.09 | 34.16 |
| HORVU3Hr1G078150.2 | Barley | nucleus, plastid | 35.65 | 34.02 |
| HORVU0Hr1G007050.2 | Barley | nucleus, plastid | 35.65 | 34.02 |
| GSMUA_Achr8P03550_001 | Banana | nucleus | 31.74 | 33.8 |
| TraesCS3D01G321500.1 | Wheat | nucleus | 36.09 | 33.74 |
| Zm00001d038585_P001 | Maize | mitochondrion, nucleus | 32.17 | 33.64 |
| TraesCS3A01G328000.1 | Wheat | nucleus | 36.09 | 33.6 |
| TraesCS1A01G314300.1 | Wheat | nucleus | 34.35 | 33.47 |
| Zm00001d043205_P001 | Maize | nucleus | 34.35 | 33.33 |
| GSMUA_Achr10P... | Banana | nucleus | 32.17 | 33.33 |
| GSMUA_Achr6P00250_001 | Banana | nucleus | 34.35 | 33.05 |
| Os05t0497300-01 | Rice | nucleus | 33.91 | 33.05 |
| Zm00001d000339_P001 | Maize | nucleus | 33.48 | 33.05 |
| TraesCS1B01G326600.1 | Wheat | nucleus | 34.35 | 32.92 |
| Zm00001d012585_P001 | Maize | nucleus | 34.35 | 32.78 |
| OQU87713 | Sorghum | nucleus, plastid | 34.35 | 32.64 |
| GSMUA_Achr4P23620_001 | Banana | nucleus | 31.3 | 32.14 |
| EES19749 | Sorghum | nucleus, plastid | 35.65 | 31.91 |
| KRH45546 | Soybean | nucleus | 24.78 | 31.67 |
| PGSC0003DMT400037359 | Potato | mitochondrion, nucleus | 30.43 | 31.39 |
| PGSC0003DMT400057443 | Potato | nucleus | 30.87 | 29.58 |
| PGSC0003DMT400056527 | Potato | nucleus | 20.0 | 28.75 |
| PGSC0003DMT400035731 | Potato | nucleus | 35.22 | 27.27 |
| GSMUA_Achr4P33270_001 | Banana | nucleus | 30.87 | 26.69 |
| PGSC0003DMT400005596 | Potato | nucleus, plastid | 20.43 | 23.98 |
| PGSC0003DMT400008830 | Potato | nucleus | 24.35 | 22.05 |
| PGSC0003DMT400011492 | Potato | nucleus | 24.35 | 22.05 |
| PGSC0003DMT400005585 | Potato | nucleus, plastid | 21.74 | 17.24 |
| PGSC0003DMT400047887 | Potato | nucleus | 26.96 | 15.9 |
| PGSC0003DMT400058356 | Potato | nucleus | 20.87 | 14.08 |
Protein Annotations
| EntrezGene:102596847 | MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| UniProt:M1AZ27 | PFAM:PF00847 | EnsemblPlantsGene:PGSC0003DMG400012828 | PGSC:PGSC0003DMG400012828 | EnsemblPlants:PGSC0003DMT400033391 | PRINTS:PR00367 |
| PFscan:PS51032 | PANTHER:PTHR31190 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000295EDDC | RefSeq:XP_006343223.1 |
| SEG:seg | : | : | : | : | : |
Description
Class II ethylene responsive element binding factor [Source:PGSC_GENE;Acc:PGSC0003DMG400012828]
Coordinates
chr3:+:1758439..1759526
Molecular Weight (calculated)
23877.3 Da
IEP (calculated)
9.074
GRAVY (calculated)
-0.164
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPKQKCTTA ATAVTVTTAV TAAAVKEVHY RGVRKRPWGR YAAEIRDPGK KCRVWLGTFD TAEEAARAYD KAAREFRGVK AKTNFQIVMQ PEDVNRSPSQ
101: TSTVESSSAA VAVAAAAVTV TATAAAMVES VPLDLSLGSS SSVGIFSNGV GKFLFQNSPT GGITPPMYYL QGAGVIRNGG GSGDGGAAAG GQSGMMKSES
201: DSSTVIDFMG NDLKPKANFD LNLLPAPEDM
101: TSTVESSSAA VAVAAAAVTV TATAAAMVES VPLDLSLGSS SSVGIFSNGV GKFLFQNSPT GGITPPMYYL QGAGVIRNGG GSGDGGAAAG GQSGMMKSES
201: DSSTVIDFMG NDLKPKANFD LNLLPAPEDM
001: MAKMGLKPDP ATTNQTHNNA KEIRYRGVRK RPWGRYAAEI RDPGKKTRVW LGTFDTAEEA ARAYDTAARD FRGAKAKTNF PTFLELSDQK VPTGFARSPS
101: QSSTLDCASP PTLVVPSATA GNVPPQLELS LGGGGGGSCY QIPMSRPVYF LDLMGIGNVG RGQPPPVTSA FRSPVVHVAT KMACGAQSDS DSSSVVDFEG
201: GMEKRSQLLD LDLNLPPPSE QA
101: QSSTLDCASP PTLVVPSATA GNVPPQLELS LGGGGGGSCY QIPMSRPVYF LDLMGIGNVG RGQPPPVTSA FRSPVVHVAT KMACGAQSDS DSSSVVDFEG
201: GMEKRSQLLD LDLNLPPPSE QA
Arabidopsis Description
ERF4Ethylene-responsive transcription factor 4 [Source:UniProtKB/Swiss-Prot;Acc:O80340]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.