Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 3
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400030829 | |
| PGSC0003DMT400054421 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G24590.1 | PGSC0003DMT400030829 | AT1G30490.1 | 17376809 |
| AT1G24590.1 | PGSC0003DMT400054421 | AT1G30490.1 | 17376809 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g013540.1.1 | Tomato | nucleus | 88.46 | 89.38 |
| PGSC0003DMT400011492 | Potato | nucleus | 29.23 | 44.88 |
| PGSC0003DMT400008830 | Potato | nucleus | 29.23 | 44.88 |
| KRH74517 | Soybean | nucleus | 36.41 | 39.12 |
| KRH69639 | Soybean | nucleus | 37.18 | 37.08 |
| PGSC0003DMT400076408 | Potato | nucleus | 14.36 | 36.6 |
| KRG99434 | Soybean | nucleus | 32.82 | 36.16 |
| KRH45585 | Soybean | nucleus | 32.31 | 35.59 |
| GSMUA_AchrUn_... | Banana | nucleus | 25.13 | 35.0 |
| AT1G24590.1 | Thale cress | nucleus | 27.44 | 34.97 |
| CDY51586 | Canola | nucleus | 26.41 | 34.92 |
| CDY24422 | Canola | nucleus | 26.67 | 34.78 |
| CDY36131 | Canola | nucleus | 26.41 | 34.45 |
| GSMUA_Achr9P01870_001 | Banana | nucleus | 25.38 | 34.38 |
| Bra012499.1-P | Field mustard | nucleus | 25.9 | 34.24 |
| Bra010972.1-P | Field mustard | nucleus | 26.41 | 34.22 |
| CDY03876 | Canola | nucleus | 26.15 | 34.11 |
| VIT_00s0291g00030.t01 | Wine grape | nucleus | 36.15 | 34.06 |
| PGSC0003DMT400056527 | Potato | nucleus | 13.85 | 33.75 |
| PGSC0003DMT400001820 | Potato | nucleus | 15.9 | 31.96 |
| GSMUA_Achr3P19420_001 | Banana | nucleus | 22.05 | 30.28 |
| PGSC0003DMT400036071 | Potato | nucleus | 14.62 | 30.0 |
| PGSC0003DMT400005596 | Potato | nucleus, plastid | 14.62 | 29.08 |
| HORVU6Hr1G053460.1 | Barley | nucleus | 13.08 | 28.81 |
| PGSC0003DMT400068959 | Potato | nucleus | 16.15 | 28.12 |
| PGSC0003DMT400037359 | Potato | mitochondrion, nucleus | 15.64 | 27.35 |
| PGSC0003DMT400033391 | Potato | nucleus | 15.9 | 26.96 |
| PGSC0003DMT400058751 | Potato | nucleus | 15.13 | 26.11 |
| PGSC0003DMT400057443 | Potato | nucleus | 15.38 | 25.0 |
| PGSC0003DMT400005585 | Potato | nucleus, plastid | 16.92 | 22.76 |
| Zm00001d050948_P001 | Maize | nucleus | 15.9 | 21.09 |
| EES05354 | Sorghum | nucleus | 16.41 | 20.65 |
| PGSC0003DMT400035731 | Potato | nucleus | 15.64 | 20.54 |
| PGSC0003DMT400058356 | Potato | nucleus | 17.44 | 19.94 |
| TraesCS6B01G237700.1 | Wheat | nucleus | 15.13 | 19.8 |
| TraesCS6D01G192200.1 | Wheat | nucleus | 15.13 | 19.8 |
| TraesCS6A01G208700.1 | Wheat | nucleus | 15.13 | 19.73 |
| Os02t0594300-00 | Rice | nucleus | 15.64 | 17.68 |
Protein Annotations
| EntrezGene:102590234 | MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| UniProt:M1BLL2 | PFAM:PF00847 | EnsemblPlantsGene:PGSC0003DMG400018613 | PGSC:PGSC0003DMG400018613 | EnsemblPlants:PGSC0003DMT400047887 | PRINTS:PR00367 |
| PFscan:PS51032 | PANTHER:PTHR31677 | PANTHER:PTHR31677:SF9 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI00029542B9 |
| RefSeq:XP_006357626.1 | SEG:seg | : | : | : | : |
Description
AP2/ERF domain-containing transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400018613]
Coordinates
chr5:+:10391299..10392706
Molecular Weight (calculated)
43020.8 Da
IEP (calculated)
8.044
GRAVY (calculated)
-0.621
Length
390 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDAMRRLNQ ESDLPLQNTT NSTTVNKTRS SCSSNKRSLK DTTTGPSAVR YRGVRRRPWG RYAAEIRDPQ SKERRWLGTF DTAEEAACAY DCAARAMRGV
101: KARTNFVYPP CPTPTQPTST NDALFNIHSS YNSLKSTSPY YHQSSNTLNR PFFHSSSPYG STGRGHVIGS TCQKNNDSLN MLLFRELLSS NSSNNSTASN
201: LNVAGSMNMP NLYEQLPNFM TNRNTSSFCS YLPTSSNTVI PSSSVMTTQV PKFDNTIHFT VNNSSTTAHD SAAGMDFFPF ESSDSGLLEE ALNGFFPKPK
301: PIKSSLPNYS TKGEFCNIFS QQPQQLQQEQ INDGGLNSDF GLLSSSSSLS SFPVDYFPGN LQVSPGDNMM GDIFQYPDLL SIFAAKLQNA
101: KARTNFVYPP CPTPTQPTST NDALFNIHSS YNSLKSTSPY YHQSSNTLNR PFFHSSSPYG STGRGHVIGS TCQKNNDSLN MLLFRELLSS NSSNNSTASN
201: LNVAGSMNMP NLYEQLPNFM TNRNTSSFCS YLPTSSNTVI PSSSVMTTQV PKFDNTIHFT VNNSSTTAHD SAAGMDFFPF ESSDSGLLEE ALNGFFPKPK
301: PIKSSLPNYS TKGEFCNIFS QQPQQLQQEQ INDGGLNSDF GLLSSSSSLS SFPVDYFPGN LQVSPGDNMM GDIFQYPDLL SIFAAKLQNA
001: MEEAIMRLEG AEHRETNIHS LKRKPSRTSS TAPGSPGGVT TAKAASGAGA SGVSTIRYRG VRRRPWGRYA AEIRDPLSKE RRWLGTFDTA EEAACAYDCA
101: ARAMRGLKAR TNFVYPMPSL DSYHHRIFSS PPMNMFLLRD VLNSQSLSPL TTFAYPPCNL SNVNDVVHES FTNVNDVCED LSPKAKRSST IENESLISNI
201: FEPEPASSGL LQEIVQGFLP KPISQHASIP PKSNQQSVGV FPTMPESGFQ TDVRLADFHV EGNGFGQVKY HGELGWADHE NGFDSAKMQQ NGNGGMFYQY
301: CFHDDY
101: ARAMRGLKAR TNFVYPMPSL DSYHHRIFSS PPMNMFLLRD VLNSQSLSPL TTFAYPPCNL SNVNDVVHES FTNVNDVCED LSPKAKRSST IENESLISNI
201: FEPEPASSGL LQEIVQGFLP KPISQHASIP PKSNQQSVGV FPTMPESGFQ TDVRLADFHV EGNGFGQVKY HGELGWADHE NGFDSAKMQQ NGNGGMFYQY
301: CFHDDY
Arabidopsis Description
ESR2Ethylene-responsive transcription factor ESR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYK5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.