Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g009110.1.1 | Tomato | nucleus | 88.94 | 90.54 |
| GSMUA_Achr7P00350_001 | Banana | nucleus | 30.09 | 61.82 |
| KRH32582 | Soybean | nucleus | 24.34 | 60.44 |
| VIT_10s0003g00140.t01 | Wine grape | nucleus | 53.54 | 53.3 |
| KRH21384 | Soybean | nucleus | 50.44 | 51.35 |
| VIT_12s0028g03270.t01 | Wine grape | nucleus | 45.13 | 48.34 |
| KRH10927 | Soybean | nucleus | 46.46 | 47.95 |
| CDX89866 | Canola | nucleus | 35.4 | 44.44 |
| PGSC0003DMT400068959 | Potato | nucleus | 43.81 | 44.2 |
| Bra015266.1-P | Field mustard | nucleus | 35.4 | 43.72 |
| CDY18185 | Canola | nucleus | 34.51 | 43.33 |
| PGSC0003DMT400076408 | Potato | nucleus | 28.76 | 42.48 |
| GSMUA_Achr9P11480_001 | Banana | nucleus | 42.48 | 42.48 |
| Os01t0797600-01 | Rice | nucleus, plastid | 42.04 | 40.43 |
| Zm00001d000339_P001 | Maize | nucleus | 41.59 | 40.34 |
| TraesCS1D01G314800.1 | Wheat | nucleus | 41.59 | 39.83 |
| GSMUA_Achr4P23620_001 | Banana | nucleus | 39.38 | 39.73 |
| Zm00001d043205_P001 | Maize | nucleus | 41.59 | 39.66 |
| TraesCS1A01G314300.1 | Wheat | nucleus | 41.15 | 39.41 |
| Os05t0497300-01 | Rice | nucleus | 40.71 | 38.98 |
| PGSC0003DMT400036071 | Potato | nucleus | 32.74 | 38.95 |
| GSMUA_Achr8P03550_001 | Banana | nucleus | 37.17 | 38.89 |
| OQU87713 | Sorghum | nucleus, plastid | 41.59 | 38.84 |
| TraesCS1B01G326600.1 | Wheat | nucleus | 41.15 | 38.75 |
| HORVU0Hr1G007050.2 | Barley | nucleus, plastid | 41.15 | 38.59 |
| HORVU3Hr1G078150.2 | Barley | nucleus, plastid | 41.15 | 38.59 |
| GSMUA_Achr6P00250_001 | Banana | nucleus | 40.71 | 38.49 |
| TraesCS3B01G357500.1 | Wheat | nucleus, plastid | 41.15 | 38.27 |
| TraesCS3D01G321500.1 | Wheat | nucleus | 41.59 | 38.21 |
| Zm00001d038585_P001 | Maize | mitochondrion, nucleus | 37.17 | 38.18 |
| TraesCS3A01G328000.1 | Wheat | nucleus | 41.59 | 38.06 |
| Zm00001d012585_P001 | Maize | nucleus | 40.27 | 37.76 |
| PGSC0003DMT400001820 | Potato | nucleus | 32.3 | 37.63 |
| EES19749 | Sorghum | nucleus, plastid | 42.48 | 37.35 |
| PGSC0003DMT400033391 | Potato | nucleus | 36.28 | 35.65 |
| KRH45546 | Soybean | nucleus | 27.88 | 35.0 |
| GSMUA_Achr10P... | Banana | nucleus | 32.74 | 33.33 |
| PGSC0003DMT400035731 | Potato | nucleus | 43.36 | 33.0 |
| GSMUA_Achr4P33270_001 | Banana | nucleus | 38.5 | 32.71 |
| PGSC0003DMT400037359 | Potato | mitochondrion, nucleus | 30.97 | 31.39 |
| PGSC0003DMT400057443 | Potato | nucleus | 31.42 | 29.58 |
| PGSC0003DMT400056527 | Potato | nucleus | 19.91 | 28.12 |
| PGSC0003DMT400005596 | Potato | nucleus, plastid | 20.35 | 23.47 |
| PGSC0003DMT400011492 | Potato | nucleus | 24.78 | 22.05 |
| PGSC0003DMT400008830 | Potato | nucleus | 24.78 | 22.05 |
| PGSC0003DMT400005585 | Potato | nucleus, plastid | 21.24 | 16.55 |
| PGSC0003DMT400047887 | Potato | nucleus | 26.11 | 15.13 |
| PGSC0003DMT400058356 | Potato | nucleus | 21.68 | 14.37 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | ProteinID:ABK96798 | ProteinID:ABK96798.1 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| ncoils:Coil | InterPro:DNA-bd_dom_sf | EMBL:EF091875 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M1C387 | PFAM:PF00847 | EnsemblPlantsGene:PGSC0003DMG400022823 |
| PGSC:PGSC0003DMG400022823 | EnsemblPlants:PGSC0003DMT400058751 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31677 | PANTHER:PTHR31677:SF19 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI00029622AB | SEG:seg | : | : |
Description
Ethylene response factor 3 [Source:PGSC_GENE;Acc:PGSC0003DMG400022823]
Coordinates
chr10:+:4698822..4700272
Molecular Weight (calculated)
24400.1 Da
IEP (calculated)
9.793
GRAVY (calculated)
-0.355
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPKEKIGAV TAAAAAAVMA VGKLNGISKE VHYRGVRKRP WGRYAAEIRD PGKKSRVWLG TFDTAEEAAK AYDNAAREFR GAKAKTNFPP LQKEEDLKFP
101: VKNEINRSPS QTSTVESSSP VMVDSSSPLD LRLCGSIGGF NHNTVRFPIS GGGFTGAVPA VNHMYYLEAL ARAGVINLET NRKKTVDFLG GGDSDTSTVI
201: DFMRVDVKPT IAGLNLDLNF PPPENM
101: VKNEINRSPS QTSTVESSSP VMVDSSSPLD LRLCGSIGGF NHNTVRFPIS GGGFTGAVPA VNHMYYLEAL ARAGVINLET NRKKTVDFLG GGDSDTSTVI
201: DFMRVDVKPT IAGLNLDLNF PPPENM
001: MAKMGLKPDP ATTNQTHNNA KEIRYRGVRK RPWGRYAAEI RDPGKKTRVW LGTFDTAEEA ARAYDTAARD FRGAKAKTNF PTFLELSDQK VPTGFARSPS
101: QSSTLDCASP PTLVVPSATA GNVPPQLELS LGGGGGGSCY QIPMSRPVYF LDLMGIGNVG RGQPPPVTSA FRSPVVHVAT KMACGAQSDS DSSSVVDFEG
201: GMEKRSQLLD LDLNLPPPSE QA
101: QSSTLDCASP PTLVVPSATA GNVPPQLELS LGGGGGGSCY QIPMSRPVYF LDLMGIGNVG RGQPPPVTSA FRSPVVHVAT KMACGAQSDS DSSSVVDFEG
201: GMEKRSQLLD LDLNLPPPSE QA
Arabidopsis Description
ERF4Ethylene-responsive transcription factor 4 [Source:UniProtKB/Swiss-Prot;Acc:O80340]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.