Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400005596 | Potato | nucleus, plastid | 64.83 | 95.92 |
| Solyc11g045680.1.1 | Tomato | nucleus, plastid | 87.59 | 87.29 |
| AT5G13910.1 | Thale cress | nucleus | 31.72 | 43.6 |
| CDX70526 | Canola | nucleus | 31.72 | 43.4 |
| Bra006222.1-P | Field mustard | nucleus | 31.38 | 43.13 |
| CDX78545 | Canola | nucleus | 31.03 | 42.45 |
| KRH06790 | Soybean | nucleus | 32.76 | 40.43 |
| KRH70088 | Soybean | nucleus | 36.55 | 38.69 |
| KRH08427 | Soybean | nucleus | 36.21 | 38.32 |
| VIT_14s0068g00860.t01 | Wine grape | nucleus | 32.76 | 36.54 |
| PGSC0003DMT400056527 | Potato | nucleus | 18.62 | 33.75 |
| HORVU2Hr1G071470.1 | Barley | plastid | 30.34 | 33.46 |
| EES10693 | Sorghum | plastid | 32.76 | 33.22 |
| TraesCS2D01G286900.1 | Wheat | plastid | 29.66 | 32.82 |
| TraesCS2B01G305500.1 | Wheat | plastid | 29.66 | 32.82 |
| TraesCS2A01G288700.1 | Wheat | plastid | 29.66 | 32.82 |
| Zm00001d025298_P001 | Maize | plastid | 30.34 | 32.35 |
| Zm00001d003871_P001 | Maize | plastid | 30.0 | 32.1 |
| Os02t0520000-00 | Rice | nucleus | 26.21 | 31.8 |
| PGSC0003DMT400076408 | Potato | nucleus | 16.55 | 31.37 |
| Zm00001d016623_P001 | Maize | nucleus | 27.59 | 30.19 |
| KXG30301 | Sorghum | nucleus, plastid | 28.62 | 30.07 |
| GSMUA_Achr10P... | Banana | nucleus | 26.55 | 29.5 |
| Os04t0399800-00 | Rice | nucleus | 29.66 | 29.45 |
| GSMUA_Achr3P02360_001 | Banana | nucleus | 26.55 | 28.62 |
| Bra008793.1-P | Field mustard | nucleus | 30.0 | 27.1 |
| CDY72607 | Canola | nucleus | 30.0 | 26.93 |
| CDX91091 | Canola | nucleus | 30.34 | 25.88 |
| Bra023440.1-P | Field mustard | nucleus | 30.0 | 25.82 |
| PGSC0003DMT400001820 | Potato | nucleus | 17.24 | 25.77 |
| CDX85621 | Canola | nucleus | 30.0 | 25.44 |
| PGSC0003DMT400036071 | Potato | nucleus | 16.21 | 24.74 |
| PGSC0003DMT400011492 | Potato | nucleus | 21.03 | 24.02 |
| PGSC0003DMT400008830 | Potato | nucleus | 21.03 | 24.02 |
| PGSC0003DMT400068959 | Potato | nucleus | 17.93 | 23.21 |
| PGSC0003DMT400037359 | Potato | mitochondrion, nucleus | 17.59 | 22.87 |
| PGSC0003DMT400033391 | Potato | nucleus | 17.24 | 21.74 |
| PGSC0003DMT400058751 | Potato | nucleus | 16.55 | 21.24 |
| PGSC0003DMT400057443 | Potato | nucleus | 16.9 | 20.42 |
| PGSC0003DMT400058356 | Potato | nucleus | 22.07 | 18.77 |
| PGSC0003DMT400035731 | Potato | nucleus | 18.62 | 18.18 |
| PGSC0003DMT400047887 | Potato | nucleus | 22.76 | 16.92 |
Protein Annotations
| EntrezGene:107059898 | Gene3D:3.30.730.10 | MapMan:35.1 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| UniProt:M0ZQ48 | PFAM:PF00847 | EnsemblPlantsGene:PGSC0003DMG400002185 | PGSC:PGSC0003DMG400002185 | EnsemblPlants:PGSC0003DMT400005585 | PRINTS:PR00367 |
| PFscan:PS51032 | PANTHER:PTHR31677 | PANTHER:PTHR31677:SF9 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000294A293 |
| RefSeq:XP_015162468.1 | SEG:seg | : | : | : | : |
Description
Ethylene-responsive transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400002185]
Coordinates
chr11:+:18921453..18922659
Molecular Weight (calculated)
33107.5 Da
IEP (calculated)
5.338
GRAVY (calculated)
-1.039
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLINSSTFS STSKSTKQRK NVGASTQSIK QKAEEQQSNF RYLGVRRRPW GRYAAEIRDP NTKERHWLGT FDTAEEAALA YDRAARSMRV NNKSNKPTRT
101: NFVYSDMPHG YSVTCIVSPD DEYQHHHHQQ QQKQLLVFDQ TENAPAPNVD YEAQFSHFSL SNMNNVGGDS CDGGEFVSQQ YYNPNYDVHM EDGYRYDSKN
201: RTSTELPPLP EDITSSGNYY NLSSEFPNSE MGYNSKNEMI IGTNNEYHQY GASTMTTTTA GNFSYFGFDD CLQPLQDNPS NNNSLGYWFS
101: NFVYSDMPHG YSVTCIVSPD DEYQHHHHQQ QQKQLLVFDQ TENAPAPNVD YEAQFSHFSL SNMNNVGGDS CDGGEFVSQQ YYNPNYDVHM EDGYRYDSKN
201: RTSTELPPLP EDITSSGNYY NLSSEFPNSE MGYNSKNEMI IGTNNEYHQY GASTMTTTTA GNFSYFGFDD CLQPLQDNPS NNNSLGYWFS
001: MNTTSSKSKK KQDDQVGTRF LGVRRRPWGR YAAEIRDPTT KERHWLGTFD TAEEAALAYD RAARSMRGTR ARTNFVYSDM PPSSSVTSIV SPDDPPPPPP
101: PPAPPSNDPV DYMMMFNQYS STDSPMLQPH CDQVDSYMFG GSQSSNSYCY SNDSSNELPP LPSDLSNSCY SQPQWTWTGD DYSSEYVHSP MFSRMPPVSD
201: SFPQGFNYFG S
101: PPAPPSNDPV DYMMMFNQYS STDSPMLQPH CDQVDSYMFG GSQSSNSYCY SNDSSNELPP LPSDLSNSCY SQPQWTWTGD DYSSEYVHSP MFSRMPPVSD
201: SFPQGFNYFG S
Arabidopsis Description
LEPLEP [Source:UniProtKB/TrEMBL;Acc:A0A178UQP2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.