Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023440.1-P | Field mustard | nucleus | 95.32 | 96.74 |
| CDX91091 | Canola | nucleus | 93.86 | 94.41 |
| CDY72607 | Canola | nucleus | 82.75 | 87.62 |
| CDX78545 | Canola | nucleus | 51.17 | 82.55 |
| CDX70526 | Canola | nucleus | 50.88 | 82.08 |
| AT5G13910.1 | Thale cress | nucleus | 49.42 | 80.09 |
| KRH06790 | Soybean | nucleus | 28.95 | 42.13 |
| VIT_14s0068g00860.t01 | Wine grape | nucleus | 31.29 | 41.15 |
| KRH70088 | Soybean | nucleus | 31.29 | 39.05 |
| PGSC0003DMT400005596 | Potato | nucleus, plastid | 21.93 | 38.27 |
| KRH08427 | Soybean | nucleus | 29.53 | 36.86 |
| CDY15690 | Canola | nucleus | 24.85 | 35.56 |
| CDY11748 | Canola | nucleus | 23.98 | 35.5 |
| CDX94591 | Canola | nucleus | 24.85 | 35.27 |
| CDX90126 | Canola | nucleus | 23.98 | 35.04 |
| CDY25733 | Canola | nucleus | 13.74 | 34.06 |
| TraesCS2A01G288700.1 | Wheat | plastid | 25.44 | 33.21 |
| HORVU2Hr1G071470.1 | Barley | plastid | 25.44 | 33.08 |
| TraesCS2B01G305500.1 | Wheat | plastid | 25.15 | 32.82 |
| TraesCS2D01G286900.1 | Wheat | plastid | 25.15 | 32.82 |
| Os02t0520000-00 | Rice | nucleus | 22.51 | 32.22 |
| Os04t0399800-00 | Rice | nucleus | 27.49 | 32.19 |
| Zm00001d003871_P001 | Maize | plastid | 25.44 | 32.1 |
| Zm00001d025298_P001 | Maize | plastid | 25.44 | 31.99 |
| GSMUA_Achr10P... | Banana | nucleus | 23.98 | 31.42 |
| Zm00001d016623_P001 | Maize | nucleus | 24.27 | 31.32 |
| GSMUA_Achr3P02360_001 | Banana | nucleus | 24.56 | 31.23 |
| CDY34104 | Canola | nucleus | 14.62 | 30.86 |
| CDY70796 | Canola | nucleus | 14.33 | 30.43 |
| CDY70175 | Canola | nucleus | 14.91 | 30.36 |
| KXG30301 | Sorghum | nucleus, plastid | 24.27 | 30.07 |
| EES10693 | Sorghum | plastid | 25.15 | 30.07 |
| PGSC0003DMT400005585 | Potato | nucleus, plastid | 25.44 | 30.0 |
| CDY15673 | Canola | nucleus | 14.62 | 29.76 |
| CDX90146 | Canola | nucleus | 14.91 | 29.65 |
| CDY69368 | Canola | nucleus | 14.91 | 29.65 |
| Solyc11g045680.1.1 | Tomato | nucleus, plastid | 25.15 | 29.55 |
| CDY02523 | Canola | nucleus | 14.62 | 29.41 |
| CDY34105 | Canola | nucleus | 13.45 | 29.11 |
| CDY30806 | Canola | nucleus | 15.2 | 28.42 |
| CDX94610 | Canola | nucleus | 13.74 | 28.31 |
| CDY34107 | Canola | nucleus | 14.91 | 28.18 |
| Solyc11g045690.1.1 | Tomato | nucleus, plastid | 24.85 | 28.15 |
| CDY15674 | Canola | nucleus | 14.62 | 28.09 |
| CDX97640 | Canola | nucleus | 15.2 | 27.51 |
| CDX96955 | Canola | nucleus | 15.5 | 27.46 |
| CDY14914 | Canola | nucleus | 15.5 | 27.46 |
| CDY24111 | Canola | nucleus | 14.04 | 27.27 |
| CDX98534 | Canola | nucleus | 15.5 | 27.04 |
| CDY35734 | Canola | nucleus | 14.62 | 27.03 |
| CDY25874 | Canola | nucleus | 15.79 | 27.0 |
| CDY45936 | Canola | nucleus | 15.79 | 26.87 |
| CDX89866 | Canola | nucleus | 14.04 | 26.67 |
| CDX90145 | Canola | nucleus | 14.33 | 26.63 |
| CDX75817 | Canola | nucleus | 15.79 | 26.47 |
| CDX82442 | Canola | nucleus | 15.79 | 26.47 |
| CDY61213 | Canola | nucleus | 13.74 | 26.4 |
| CDY18185 | Canola | nucleus | 13.74 | 26.11 |
| CDY20105 | Canola | nucleus | 15.79 | 25.84 |
| CDY32314 | Canola | nucleus | 15.79 | 24.77 |
| CDY22810 | Canola | nucleus | 14.62 | 24.63 |
| CDY37113 | Canola | mitochondrion, nucleus | 14.62 | 24.04 |
| CDY26598 | Canola | nucleus | 13.74 | 23.74 |
| CDX82253 | Canola | nucleus | 14.62 | 23.26 |
| CDY16037 | Canola | nucleus | 13.45 | 23.23 |
| CDY36045 | Canola | nucleus | 14.62 | 23.04 |
| CDY68296 | Canola | nucleus | 21.05 | 22.29 |
| CDY36131 | Canola | nucleus | 19.01 | 21.74 |
| CDY58106 | Canola | nucleus | 21.05 | 21.69 |
| CDY02618 | Canola | nucleus | 21.05 | 21.69 |
| CDY61906 | Canola | cytosol | 8.48 | 21.48 |
| CDY13901 | Canola | nucleus | 21.05 | 21.43 |
| CDY24422 | Canola | nucleus | 18.71 | 21.4 |
| CDY03876 | Canola | nucleus | 18.71 | 21.4 |
| CDY51586 | Canola | nucleus | 18.42 | 21.36 |
| CDX88931 | Canola | nucleus | 20.18 | 20.97 |
| CDX70826 | Canola | nucleus | 19.59 | 20.24 |
| CDY16048 | Canola | nucleus | 16.37 | 19.18 |
| CDY26605 | Canola | nucleus | 16.08 | 18.71 |
| CDY19407 | Canola | nucleus | 17.25 | 18.67 |
| CDY46294 | Canola | nucleus | 7.02 | 16.67 |
| CDX98022 | Canola | nucleus | 2.63 | 4.55 |
Protein Annotations
| Gene3D:1.10.110.10 | MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078D8N8 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store | EnsemblPlants:CDX85621 | ProteinID:CDX85621 | ProteinID:CDX85621.1 | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00143349001 |
| InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 | PFAM:PF14368 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31677 | PANTHER:PTHR31677:SF40 | SMART:SM00380 | SUPFAM:SSF47699 | SUPFAM:SSF54171 | TMHMM:TMhelix |
| UniParc:UPI0004EE9F4C | SEG:seg | : | : | : | : |
Description
BnaA02g01920D
Coordinates
chrLK031842:+:900356..902078
Molecular Weight (calculated)
37395.7 Da
IEP (calculated)
5.366
GRAVY (calculated)
-0.374
Length
342 amino acids
Sequence
(BLAST)
(BLAST)
001: MNTSKSKKKQ EEAGTKFLGV RRRPWGRYAA EIRDPTTKER HWLGTFDTAE EAALAYDRAA RSMRGTRART NFVYSDMPPS SSVTSIISPD DPTPTPPPPP
101: PAATPCSDDP VDYLMMFNQY SSTDSPMLQP AQVESSYMFG GSPSCYSNSS SELPPLPSDL SNSCYSQQPW SVEDYSSATY FEGEYVHSPM FSTMPSFFSF
201: YAIVAALLVV ANFGIIHTSG QSVSCLNQLA PCLNYLNGTK DVPEICCNPL NSVIRNNPEC LCRMISNRGS SKAEQAGINV NDAQMLPARC GEHVNPIACL
301: TRSRGSTNAD QSSSTGNSSS QSYWMTTLAF AVTLLSFILQ IN
101: PAATPCSDDP VDYLMMFNQY SSTDSPMLQP AQVESSYMFG GSPSCYSNSS SELPPLPSDL SNSCYSQQPW SVEDYSSATY FEGEYVHSPM FSTMPSFFSF
201: YAIVAALLVV ANFGIIHTSG QSVSCLNQLA PCLNYLNGTK DVPEICCNPL NSVIRNNPEC LCRMISNRGS SKAEQAGINV NDAQMLPARC GEHVNPIACL
301: TRSRGSTNAD QSSSTGNSSS QSYWMTTLAF AVTLLSFILQ IN
001: MNTTSSKSKK KQDDQVGTRF LGVRRRPWGR YAAEIRDPTT KERHWLGTFD TAEEAALAYD RAARSMRGTR ARTNFVYSDM PPSSSVTSIV SPDDPPPPPP
101: PPAPPSNDPV DYMMMFNQYS STDSPMLQPH CDQVDSYMFG GSQSSNSYCY SNDSSNELPP LPSDLSNSCY SQPQWTWTGD DYSSEYVHSP MFSRMPPVSD
201: SFPQGFNYFG S
101: PPAPPSNDPV DYMMMFNQYS STDSPMLQPH CDQVDSYMFG GSQSSNSYCY SNDSSNELPP LPSDLSNSCY SQPQWTWTGD DYSSEYVHSP MFSRMPPVSD
201: SFPQGFNYFG S
Arabidopsis Description
LEPLEP [Source:UniProtKB/TrEMBL;Acc:A0A178UQP2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.