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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plastid 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra002168.1-P Field mustard nucleus, plastid 93.45 99.05
CDY68296 Canola nucleus 94.64 98.45
CDY02618 Canola nucleus 85.12 86.14
CDY58106 Canola nucleus 85.12 86.14
CDX70826 Canola nucleus 82.14 83.38
CDX88931 Canola nucleus 81.25 82.98
AT5G18560.1 Thale cress nucleus 84.82 81.9
CDX78545 Canola nucleus 21.73 34.43
CDY25733 Canola nucleus 13.99 34.06
CDX70526 Canola nucleus 21.43 33.96
Solyc01g067540.1.1 Tomato nucleus 32.44 33.96
CDY70175 Canola nucleus 16.96 33.93
CDY15673 Canola nucleus 16.67 33.33
CDY70796 Canola nucleus 15.77 32.92
TraesCS2A01G116900.1 Wheat nucleus 29.17 32.78
Zm00001d007119_P001 Maize nucleus 28.87 32.77
CDY34105 Canola nucleus 15.18 32.28
CDY34104 Canola nucleus 15.48 32.1
Zm00001d022488_P001 Maize nucleus 30.06 32.06
CDX90146 Canola nucleus 16.37 31.98
CDY69368 Canola nucleus 16.37 31.98
TraesCS2D01G118200.1 Wheat nucleus, plastid 27.98 31.86
TraesCS2B01G136100.1 Wheat nucleus 28.87 31.6
Os07t0669500-01 Rice nucleus, plastid 29.76 31.45
GSMUA_Achr8P30180_001 Banana nucleus 29.17 31.41
PGSC0003DMT400058356 Potato nucleus 31.85 31.38
CDY02523 Canola nucleus 15.77 31.18
KXG36907 Sorghum nucleus 30.06 30.89
CDX90126 Canola nucleus 20.54 29.49
CDY11748 Canola nucleus 20.24 29.44
CDX97640 Canola nucleus 16.07 28.57
CDY22810 Canola nucleus 17.26 28.57
CDX94610 Canola nucleus 13.99 28.31
CDY15674 Canola nucleus 14.88 28.09
CDX98534 Canola nucleus 16.37 28.06
CDY15690 Canola nucleus 19.94 28.03
CDX96955 Canola nucleus 16.07 27.98
CDY14914 Canola nucleus 16.07 27.98
CDY37113 Canola mitochondrion, nucleus 17.26 27.88
CDX94591 Canola nucleus 19.94 27.8
CDX89866 Canola nucleus 14.88 27.78
CDY34107 Canola nucleus 14.88 27.62
CDX75817 Canola nucleus 16.67 27.45
CDX82442 Canola nucleus 16.67 27.45
CDY30806 Canola nucleus 14.88 27.32
CDY24111 Canola nucleus 13.99 26.7
CDY18185 Canola nucleus 14.29 26.67
CDX82253 Canola nucleus 16.96 26.51
CDY61213 Canola nucleus 13.99 26.4
CDY20105 Canola nucleus 16.37 26.32
CDY32314 Canola nucleus 16.96 26.15
CDX90145 Canola nucleus 14.29 26.09
CDY45936 Canola nucleus 15.48 25.87
CDY36045 Canola nucleus 16.67 25.81
CDY35734 Canola nucleus 13.99 25.41
CDY61906 Canola cytosol 10.12 25.19
CDY25874 Canola nucleus 14.88 25.0
CDY16048 Canola nucleus 20.24 23.29
CDY26605 Canola nucleus 20.24 23.13
CDY24422 Canola nucleus 20.54 23.08
CDY03876 Canola nucleus 20.54 23.08
CDY36131 Canola nucleus 20.54 23.08
CDY19407 Canola nucleus 21.43 22.78
CDY26598 Canola nucleus 13.39 22.73
CDY16037 Canola nucleus 13.39 22.73
CDY51586 Canola nucleus 19.64 22.37
CDY72607 Canola nucleus 20.83 21.67
CDX91091 Canola nucleus 21.73 21.47
CDX85621 Canola nucleus 21.43 21.05
CDX98022 Canola nucleus 8.63 14.65
CDY46294 Canola nucleus 5.06 11.81
Protein Annotations
MapMan:15.5.7.1Gene3D:3.30.730.10GO:A0A078FL97UniProt:A0A078FL97InterPro:AP2/ERF_domInterPro:AP2/ERF_dom_sf
EnsemblPlants:CDY13901ProteinID:CDY13901ProteinID:CDY13901.1InterPro:DNA-bd_dom_sfGO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:GSBRNA2T00078358001InterPro:IPR001471InterPro:IPR036955PFAM:PF00847
PRINTS:PR00367PFscan:PS51032PANTHER:PTHR31677PANTHER:PTHR31677:SF40SMART:SM00380SUPFAM:SSF54171
UniParc:UPI0004EF11AESEG:seg::::
Description
BnaC09g39250DBnaC09g39250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FL97]
Coordinates
chrLK032039:-:27831..28841
Molecular Weight (calculated)
36860.5 Da
IEP (calculated)
6.842
GRAVY (calculated)
-0.635
Length
336 amino acids
Sequence
(BLAST)
001: MSTSKTLNHN KPCGTSQTQM VFSVIHQNTT NTTTTTTATT GERRGRRSKQ AEPGRFLGVR RRPWGRYAAE IRDPTTKERH WLGTFDTAHE AALAYDRAAL
101: SMRGTQGRTN FVYTPTDVHT ILTNPNLHSL IVSPYNNQSF LPNSSPQFVI DHLPHYQKYQ QPKHTLPQAV SPVASFKTPV RHQNADTQAF GNSPQNSSSN
201: GSLSSSLDEE GNFFSLEGTN SSTNSGYLDC IVPHHCLKPP AETTTIQNQT GAGFTTPASK AFESPGGFSS SYFDDGDMLM MNRHEFGSCD LSAMSTNYGA
301: GASMSMEDYA IMEPQDFSSP IAAFGDVTDT GFYSLY
Best Arabidopsis Sequence Match ( AT5G18560.1 )
(BLAST)
001: MSTSKTLDHN KPFETSQTQM GFALIHQNTS ANTTTTTTTG ERRGRRSKQA EPGRFLGVRR RPWGRYAAEI RDPTTKERHW LGTFDTAHEA ALAYDRAALS
101: MRGTQARTNF VYTPTDVHTI LTNPNLHSLI VSPYNNNQSF LPNSSPQFVI DHHPHYQNYH QPQQPKHTLP QTVLPAASFK TPVRHQSVDI QAFGNSPQNS
201: SSNGSLSSSL DEENNFFFSL TSEEHNKSNN NSGYLDCIVP NHCLKPPPEA TTTQNQAGAS FTTPVASKAS EPYGGFSNSY FEDGEMMMMN HHEFGSCDLS
301: AMITNYGAAA ASMSMEDYGM MEPQDLSSSS IAAFGDVVAD TTGFYSVF
Arabidopsis Description
ERF086PUCHI [Source:UniProtKB/TrEMBL;Acc:A0A178URC3]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.