Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY02618 | Canola | nucleus | 84.2 | 88.25 |
| CDY58106 | Canola | nucleus | 84.2 | 88.25 |
| Bra023684.1-P | Field mustard | nucleus, plastid | 78.74 | 87.54 |
| CDX70826 | Canola | nucleus | 82.76 | 87.01 |
| CDX88931 | Canola | nucleus | 82.18 | 86.93 |
| Bra006466.1-P | Field mustard | nucleus, plastid | 77.3 | 86.77 |
| CDY13901 | Canola | nucleus | 81.9 | 84.82 |
| Bra002168.1-P | Field mustard | nucleus, plastid | 77.01 | 84.54 |
| CDY68296 | Canola | nucleus | 78.16 | 84.21 |
| Solyc01g067540.1.1 | Tomato | nucleus | 33.05 | 35.83 |
| KRH50906 | Soybean | nucleus | 35.06 | 35.26 |
| KRH02219 | Soybean | nucleus | 35.34 | 34.75 |
| AT5G13910.1 | Thale cress | nucleus | 20.4 | 33.65 |
| Zm00001d007119_P001 | Maize | nucleus | 28.45 | 33.45 |
| GSMUA_Achr8P30180_001 | Banana | nucleus | 29.6 | 33.01 |
| TraesCS2A01G116900.1 | Wheat | nucleus | 28.16 | 32.78 |
| PGSC0003DMT400058356 | Potato | nucleus | 31.9 | 32.55 |
| Zm00001d022488_P001 | Maize | nucleus | 29.31 | 32.38 |
| TraesCS2D01G118200.1 | Wheat | nucleus, plastid | 27.3 | 32.2 |
| TraesCS2B01G136100.1 | Wheat | nucleus | 27.87 | 31.6 |
| Os07t0669500-01 | Rice | nucleus, plastid | 28.74 | 31.45 |
| KXG36907 | Sorghum | nucleus | 29.31 | 31.19 |
| KRH75649 | Soybean | nucleus | 24.71 | 31.05 |
| AT1G53170.1 | Thale cress | nucleus | 15.8 | 29.73 |
| AT1G12890.1 | Thale cress | nucleus | 18.1 | 28.77 |
| AT1G28160.1 | Thale cress | nucleus | 19.83 | 28.16 |
| AT5G44210.1 | Thale cress | nucleus | 15.52 | 27.0 |
| AT3G15210.1 | Thale cress | nucleus | 16.95 | 26.58 |
| AT1G50640.1 | Thale cress | mitochondrion, nucleus | 16.67 | 25.78 |
| AT1G28370.2 | Thale cress | mitochondrion, nucleus, plastid | 14.94 | 25.49 |
| AT1G28360.1 | Thale cress | nucleus | 13.79 | 25.4 |
| AT1G24590.1 | Thale cress | nucleus | 20.69 | 23.53 |
| AT1G03800.1 | Thale cress | nucleus | 16.09 | 22.86 |
| AT3G20310.1 | Thale cress | nucleus | 15.52 | 22.13 |
| AT1G12980.1 | Thale cress | nucleus | 19.54 | 20.73 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | EntrezGene:831974 | UniProt:A0A178URC3 | EMBL:AC069328 | ProteinID:AED92579.1 |
| InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ArrayExpress:AT5G18560 | EnsemblPlantsGene:AT5G18560 | RefSeq:AT5G18560 | TAIR:AT5G18560 |
| RefSeq:AT5G18560-TAIR-G | EnsemblPlants:AT5G18560.1 | TAIR:AT5G18560.1 | EMBL:AY560873 | Unigene:At.49752 | InterPro:DNA-bd_dom_sf |
| GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009653 | GO:GO:0009719 | GO:GO:0009791 | GO:GO:0009873 | GO:GO:0009908 |
| GO:GO:0009987 | GO:GO:0010102 | GO:GO:0010432 | GO:GO:0010451 | GO:GO:0010582 | GO:GO:0040007 |
| GO:GO:0043565 | GO:GO:0044212 | InterPro:IPR001471 | InterPro:IPR036955 | RefSeq:NP_197357.2 | ProteinID:OAO96030.1 |
| PFAM:PF00847 | PO:PO:0000013 | PO:PO:0000016 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000229 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007601 | PO:PO:0007602 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0009062 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020127 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00367 |
| PFscan:PS51032 | PANTHER:PTHR31677 | PANTHER:PTHR31677:SF40 | Symbol:PUCHI | UniProt:Q6J9Q2 | SMART:SM00380 |
| SUPFAM:SSF54171 | UniParc:UPI000034F23A | SEG:seg | : | : | : |
Description
ERF086PUCHI [Source:UniProtKB/TrEMBL;Acc:A0A178URC3]
Coordinates
chr5:-:6164526..6166040
Molecular Weight (calculated)
38457.3 Da
IEP (calculated)
6.507
GRAVY (calculated)
-0.668
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTSKTLDHN KPFETSQTQM GFALIHQNTS ANTTTTTTTG ERRGRRSKQA EPGRFLGVRR RPWGRYAAEI RDPTTKERHW LGTFDTAHEA ALAYDRAALS
101: MRGTQARTNF VYTPTDVHTI LTNPNLHSLI VSPYNNNQSF LPNSSPQFVI DHHPHYQNYH QPQQPKHTLP QTVLPAASFK TPVRHQSVDI QAFGNSPQNS
201: SSNGSLSSSL DEENNFFFSL TSEEHNKSNN NSGYLDCIVP NHCLKPPPEA TTTQNQAGAS FTTPVASKAS EPYGGFSNSY FEDGEMMMMN HHEFGSCDLS
301: AMITNYGAAA ASMSMEDYGM MEPQDLSSSS IAAFGDVVAD TTGFYSVF
101: MRGTQARTNF VYTPTDVHTI LTNPNLHSLI VSPYNNNQSF LPNSSPQFVI DHHPHYQNYH QPQQPKHTLP QTVLPAASFK TPVRHQSVDI QAFGNSPQNS
201: SSNGSLSSSL DEENNFFFSL TSEEHNKSNN NSGYLDCIVP NHCLKPPPEA TTTQNQAGAS FTTPVASKAS EPYGGFSNSY FEDGEMMMMN HHEFGSCDLS
301: AMITNYGAAA ASMSMEDYGM MEPQDLSSSS IAAFGDVVAD TTGFYSVF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.