Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G118200.1 | Wheat | nucleus, plastid | 92.18 | 95.93 |
| TraesCS2A01G116900.1 | Wheat | nucleus | 91.86 | 94.31 |
| Zm00001d007119_P001 | Maize | nucleus | 66.78 | 69.26 |
| Zm00001d022488_P001 | Maize | nucleus | 70.68 | 68.89 |
| Os07t0669500-01 | Rice | nucleus, plastid | 70.68 | 68.24 |
| KXG36907 | Sorghum | nucleus | 70.03 | 65.75 |
| GSMUA_Achr8P30180_001 | Banana | nucleus | 32.9 | 32.37 |
| Solyc01g067540.1.1 | Tomato | nucleus | 31.92 | 30.53 |
| Bra023684.1-P | Field mustard | nucleus, plastid | 30.62 | 30.03 |
| CDY02618 | Canola | nucleus | 32.25 | 29.82 |
| CDY58106 | Canola | nucleus | 31.92 | 29.52 |
| CDY68296 | Canola | nucleus | 30.94 | 29.41 |
| Bra002168.1-P | Field mustard | nucleus, plastid | 30.29 | 29.34 |
| Bra006466.1-P | Field mustard | nucleus, plastid | 29.32 | 29.03 |
| CDY13901 | Canola | nucleus | 31.6 | 28.87 |
| TraesCS1B01G326500.1 | Wheat | nucleus | 17.26 | 28.8 |
| PGSC0003DMT400058356 | Potato | nucleus | 31.92 | 28.74 |
| TraesCS2B01G305500.1 | Wheat | plastid | 24.43 | 28.63 |
| CDX88931 | Canola | nucleus | 30.29 | 28.27 |
| TraesCS3B01G357600.1 | Wheat | nucleus | 15.96 | 28.16 |
| KRH11206 | Soybean | nucleus | 28.34 | 27.88 |
| AT5G18560.1 | Thale cress | nucleus | 31.6 | 27.87 |
| CDX70826 | Canola | nucleus | 29.97 | 27.79 |
| KRH21045 | Soybean | nucleus | 28.34 | 27.02 |
| TraesCS7B01G335700.1 | Wheat | nucleus | 16.94 | 26.8 |
| KRH50906 | Soybean | nucleus | 29.97 | 26.59 |
| TraesCS6B01G159600.1 | Wheat | nucleus | 17.26 | 26.11 |
| KRH02219 | Soybean | nucleus | 29.97 | 25.99 |
| TraesCS2B01G448100.1 | Wheat | nucleus | 18.24 | 25.57 |
| KRH75649 | Soybean | nucleus | 22.48 | 24.91 |
| TraesCS2B01G572500.1 | Wheat | nucleus | 15.31 | 24.61 |
| TraesCS1B01G326600.1 | Wheat | nucleus | 17.26 | 22.08 |
| TraesCS6B01G199800.1 | Wheat | nucleus | 14.66 | 22.06 |
| TraesCS3B01G357500.1 | Wheat | nucleus, plastid | 17.26 | 21.81 |
| TraesCS6B01G237700.1 | Wheat | nucleus | 14.33 | 14.77 |
| CDY46294 | Canola | nucleus | 3.91 | 8.33 |
| Bra032881.1-P | Field mustard | nucleus | 3.58 | 7.64 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009653 |
| GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0010582 | GO:GO:0045893 | GO:GO:2000032 |
| InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31677 |
| PANTHER:PTHR31677:SF40 | SMART:SM00380 | SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS2B01G136100 | EnsemblPlants:TraesCS2B01G136100.1 | TIGR:cd00018 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:103195577..103196765
Molecular Weight (calculated)
32351.2 Da
IEP (calculated)
7.206
GRAVY (calculated)
-0.604
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSRSSSGGG QASQMMAFSE HSLPKPIAGH PQPQPSPPSS PSERPAPRGR RRAQEPGRFL GVRRRPWGRY AAEIRDPTTK ERHWLGTFDT AQEAALAYDR
101: AALSMKGAQA RTNFVYAHAA YNNYPPFLAP FHAQQQPAAY ASSTMPYGGQ QRAGAAAPHI GSSYHGHGYH QQGPGAGAGE CSMPVLNAAD HGASSPMDVR
201: GSGGHDILFP SADDNSGYLS SVVPESCLRP RGGDLQDARR YSVSDADAYG LGLREDVDDL ALMVAGFWGG ADAAYGGFAP ANGGGHDMVA SSQGSDNGYS
301: PFSFLSH
101: AALSMKGAQA RTNFVYAHAA YNNYPPFLAP FHAQQQPAAY ASSTMPYGGQ QRAGAAAPHI GSSYHGHGYH QQGPGAGAGE CSMPVLNAAD HGASSPMDVR
201: GSGGHDILFP SADDNSGYLS SVVPESCLRP RGGDLQDARR YSVSDADAYG LGLREDVDDL ALMVAGFWGG ADAAYGGFAP ANGGGHDMVA SSQGSDNGYS
301: PFSFLSH
001: MSTSKTLDHN KPFETSQTQM GFALIHQNTS ANTTTTTTTG ERRGRRSKQA EPGRFLGVRR RPWGRYAAEI RDPTTKERHW LGTFDTAHEA ALAYDRAALS
101: MRGTQARTNF VYTPTDVHTI LTNPNLHSLI VSPYNNNQSF LPNSSPQFVI DHHPHYQNYH QPQQPKHTLP QTVLPAASFK TPVRHQSVDI QAFGNSPQNS
201: SSNGSLSSSL DEENNFFFSL TSEEHNKSNN NSGYLDCIVP NHCLKPPPEA TTTQNQAGAS FTTPVASKAS EPYGGFSNSY FEDGEMMMMN HHEFGSCDLS
301: AMITNYGAAA ASMSMEDYGM MEPQDLSSSS IAAFGDVVAD TTGFYSVF
101: MRGTQARTNF VYTPTDVHTI LTNPNLHSLI VSPYNNNQSF LPNSSPQFVI DHHPHYQNYH QPQQPKHTLP QTVLPAASFK TPVRHQSVDI QAFGNSPQNS
201: SSNGSLSSSL DEENNFFFSL TSEEHNKSNN NSGYLDCIVP NHCLKPPPEA TTTQNQAGAS FTTPVASKAS EPYGGFSNSY FEDGEMMMMN HHEFGSCDLS
301: AMITNYGAAA ASMSMEDYGM MEPQDLSSSS IAAFGDVVAD TTGFYSVF
Arabidopsis Description
ERF086PUCHI [Source:UniProtKB/TrEMBL;Acc:A0A178URC3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.