Factsheet for TraesCS2B01G448100.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G425700.1	Wheat	nucleus	94.98	95.85
TraesCS2A01G427700.1	Wheat	nucleus	90.41	94.29
HORVU2Hr1G099890.2	Barley	nucleus	76.26	76.96
Os04t0610400-01	Rice	nucleus	74.43	73.42
Zm00001d002364_P001	Maize	nucleus, plastid	73.52	72.52
Zm00001d026271_P001	Maize	nucleus, plastid	72.6	71.62
EES11400	Sorghum	nucleus	75.34	71.43
GSMUA_Achr8P33590_001	Banana	nucleus	43.84	51.34
Bra010880.1-P	Field mustard	nucleus	38.36	48.84
CDX90146	Canola	nucleus	38.36	48.84
CDY70175	Canola	nucleus	37.44	48.81
Bra030095.1-P	Field mustard	nucleus	37.44	48.81
CDY15673	Canola	nucleus	37.44	48.81
Bra032900.1-P	Field mustard	nucleus	35.16	48.73
CDY69368	Canola	nucleus	37.44	47.67
TraesCS2B01G572500.1	Wheat	nucleus	41.1	47.12
CDY34105	Canola	nucleus	33.79	46.84
CDY70796	Canola	nucleus	34.25	46.58
KRH26242	Soybean	nucleus	27.4	46.51
Bra032901.1-P	Field mustard	nucleus	33.33	45.06
CDY34104	Canola	nucleus	33.33	45.06
KRH55195	Soybean	nucleus	37.44	44.81
TraesCS6B01G199800.1	Wheat	nucleus	37.9	40.69
VIT_19s0014g02240.t01	Wine grape	nucleus	40.64	40.45
CDY61906	Canola	cytosol	24.66	40.0
TraesCS7B01G335700.1	Wheat	nucleus	35.16	39.69
KRH27281	Soybean	nucleus	33.79	38.34
KRH22040	Soybean	nucleus	33.79	38.34
TraesCS6B01G159600.1	Wheat	nucleus	35.16	37.93
AT1G28370.2	Thale cress	mitochondrion, nucleus, plastid	34.25	36.76
TraesCS1B01G326600.1	Wheat	nucleus	40.18	36.67
TraesCS3B01G357600.1	Wheat	nucleus	28.31	35.63
TraesCS3B01G357500.1	Wheat	nucleus, plastid	39.27	35.39
TraesCS1B01G326500.1	Wheat	nucleus	28.31	33.7
TraesCS2B01G305500.1	Wheat	plastid	26.48	22.14
TraesCS6B01G237700.1	Wheat	nucleus	25.11	18.46
TraesCS2B01G136100.1	Wheat	nucleus	25.57	18.24

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31677	PANTHER:PTHR31677:SF17	SMART:SM00380
SUPFAM:SSF54171	EnsemblPlantsGene:TraesCS2B01G448100	EnsemblPlants:TraesCS2B01G448100.1	TIGR:cd00018	SEG:seg	:

Description

No Description!

Coordinates

chr2B:-:640764718..640765377

Molecular Weight (calculated)

22279.5 Da

IEP (calculated)

8.472

GRAVY (calculated)

0.037

Length

219 amino acids

Sequence
(BLAST)

001: MAPKNALPVA VAAAADGGME PRFRGVRKRP WGRYAAEIRD PARKARVWLG TFDTAEAAAR AYDAAALHYR GPKANTNFPV GTVAAYTHIP LPPPKALAVS
101: PSSSTVESSS RDTPAAAPAA PAVAAPAAPP ALDLSLAMPT MVAAQPFLFL DPRVAVTVAV AAPAPAPAPC RSAAISGMNK VASHEEEQSD TGSSSSVVDA
201: SPAVGVGFDL NLPPPVEMA

Best Arabidopsis Sequence Match ( AT3G15210.1 )
(BLAST)

001: MAKMGLKPDP ATTNQTHNNA KEIRYRGVRK RPWGRYAAEI RDPGKKTRVW LGTFDTAEEA ARAYDTAARD FRGAKAKTNF PTFLELSDQK VPTGFARSPS
101: QSSTLDCASP PTLVVPSATA GNVPPQLELS LGGGGGGSCY QIPMSRPVYF LDLMGIGNVG RGQPPPVTSA FRSPVVHVAT KMACGAQSDS DSSSVVDFEG
201: GMEKRSQLLD LDLNLPPPSE QA

Arabidopsis Description

ERF4Ethylene-responsive transcription factor 4 [Source:UniProtKB/Swiss-Prot;Acc:O80340]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.