Factsheet for HORVU2Hr1G099890.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G427700.1	Wheat	nucleus	77.42	80.0
TraesCS2D01G425700.1	Wheat	nucleus	77.88	77.88
TraesCS2B01G448100.1	Wheat	nucleus	76.96	76.26
Zm00001d026271_P001	Maize	nucleus, plastid	64.52	63.06
Zm00001d002364_P001	Maize	nucleus, plastid	64.52	63.06
Os04t0610400-01	Rice	nucleus	63.13	61.71
EES11400	Sorghum	nucleus	64.98	61.04
GSMUA_Achr8P33590_001	Banana	nucleus	35.48	41.18
Bra030095.1-P	Field mustard	nucleus	30.41	39.29
CDY15673	Canola	nucleus	30.41	39.29
CDY70175	Canola	nucleus	30.41	39.29
Bra010880.1-P	Field mustard	nucleus	30.41	38.37
CDX90146	Canola	nucleus	30.41	38.37
Bra032900.1-P	Field mustard	nucleus	27.65	37.97
CDY69368	Canola	nucleus	29.95	37.79
CDY70796	Canola	nucleus	27.19	36.65
CDY34105	Canola	nucleus	26.27	36.08
Bra032901.1-P	Field mustard	nucleus	26.27	35.19
CDY34104	Canola	nucleus	26.27	35.19
KRH55195	Soybean	nucleus	29.49	34.97
CDY61906	Canola	cytosol	20.28	32.59
VIT_19s0014g02240.t01	Wine grape	nucleus	32.26	31.82
KRH26242	Soybean	nucleus	18.89	31.78
HORVU7Hr1G099670.1	Barley	nucleus	27.65	31.58
KRH27281	Soybean	nucleus	26.27	29.53
KRH22040	Soybean	nucleus	26.27	29.53
HORVU3Hr1G078150.2	Barley	nucleus, plastid	32.26	29.05
HORVU0Hr1G007050.2	Barley	nucleus, plastid	32.26	29.05
AT1G28370.2	Thale cress	mitochondrion, nucleus, plastid	26.73	28.43
HORVU1Hr1G067160.1	Barley	nucleus	20.28	22.92
HORVU6Hr1G053460.1	Barley	nucleus	16.59	20.34
HORVU2Hr1G071470.1	Barley	plastid	19.35	15.97

Protein Annotations

Gene3D:3.30.730.10	MapMan:35.2	UniProt:A0A287J5J3	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	ncoils:Coil
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU2Hr1G099890
EnsemblPlants:HORVU2Hr1G099890.2	InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PFscan:PS51032	PANTHER:PTHR31677
PANTHER:PTHR31677:SF17	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000B477A89	SEG:seg	:

Description

No Description!

Coordinates

chrchr2H:-:688686119..688686772

Molecular Weight (calculated)

18666.1 Da

IEP (calculated)

6.528

GRAVY (calculated)

-0.014

Length

217 amino acids

Sequence
(BLAST)

001: EGGGGEGXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX IRDPARKARV WLGTFDTAEA AARAYDAAAL HYRGPKAKTN FPVGTVAAYA HVPLPLPLPP
101: PKKLAVSPSS STVESSSRDT PAASPAAPPA LDLSLAMPAM VAAQPFLFLD PRVAVTVAVA APAPAPCRSA AISGMKNKVA SREEEQSDTG SSSSVVDTSP
201: AVGVGFDLNL PPPVEMA

Best Arabidopsis Sequence Match ( AT3G15210.1 )
(BLAST)

001: MAKMGLKPDP ATTNQTHNNA KEIRYRGVRK RPWGRYAAEI RDPGKKTRVW LGTFDTAEEA ARAYDTAARD FRGAKAKTNF PTFLELSDQK VPTGFARSPS
101: QSSTLDCASP PTLVVPSATA GNVPPQLELS LGGGGGGSCY QIPMSRPVYF LDLMGIGNVG RGQPPPVTSA FRSPVVHVAT KMACGAQSDS DSSSVVDFEG
201: GMEKRSQLLD LDLNLPPPSE QA

Arabidopsis Description

ERF4Ethylene-responsive transcription factor 4 [Source:UniProtKB/Swiss-Prot;Acc:O80340]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.