Factsheet for HORVU2Hr1G071470.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
plastid 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G288700.1	Wheat	plastid	96.96	97.33
TraesCS2B01G305500.1	Wheat	plastid	96.58	96.95
TraesCS2D01G286900.1	Wheat	plastid	95.82	96.18
Zm00001d025298_P001	Maize	plastid	76.05	73.53
Zm00001d003871_P001	Maize	plastid	74.52	72.32
EES10693	Sorghum	plastid	75.29	69.23
Os04t0399800-00	Rice	nucleus	72.62	65.41
GSMUA_Achr3P02360_001	Banana	nucleus	55.51	54.28
GSMUA_Achr10P...	Banana	nucleus	52.47	52.87
AT5G13910.1	Thale cress	nucleus	34.6	43.13
KRH08427	Soybean	nucleus	43.73	41.97
KRH70088	Soybean	nucleus	43.35	41.61
Bra006222.1-P	Field mustard	nucleus	33.08	41.23
CDX78545	Canola	nucleus	33.08	41.04
KRH06790	Soybean	nucleus	36.5	40.85
CDX70526	Canola	nucleus	32.7	40.57
VIT_14s0068g00860.t01	Wine grape	nucleus	38.4	38.85
PGSC0003DMT400005596	Potato	nucleus, plastid	28.52	38.27
PGSC0003DMT400005585	Potato	nucleus, plastid	33.46	30.34
Solyc11g045680.1.1	Tomato	nucleus, plastid	33.46	30.24
HORVU7Hr1G099670.1	Barley	nucleus	21.67	30.0
HORVU6Hr1G053460.1	Barley	nucleus	19.39	28.81
Solyc11g045690.1.1	Tomato	nucleus, plastid	32.7	28.48
HORVU1Hr1G067160.1	Barley	nucleus	20.15	27.6
CDX91091	Canola	nucleus	33.46	25.88
Bra023440.1-P	Field mustard	nucleus	33.08	25.82
HORVU0Hr1G007050.2	Barley	nucleus, plastid	23.57	25.73
HORVU3Hr1G078150.2	Barley	nucleus, plastid	23.57	25.73
CDX85621	Canola	nucleus	33.08	25.44
CDY72607	Canola	nucleus	30.8	25.08
Bra008793.1-P	Field mustard	nucleus	30.42	24.92
HORVU2Hr1G099890.2	Barley	nucleus	15.97	19.35

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU2Hr1G071470	EnsemblPlants:HORVU2Hr1G071470.1	InterPro:IPR001471
InterPro:IPR036955	UniProt:M0YVQ0	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31677
PANTHER:PTHR31677:SF40	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000294ADB8	SEG:seg	:

Description

No Description!

Coordinates

chrchr2H:+:510090640..510091987

Molecular Weight (calculated)

27934.7 Da

IEP (calculated)

4.405

GRAVY (calculated)

-0.605

Length

263 amino acids

Sequence
(BLAST)

001: MNFSSYFFSS SSSSSSSSDK KSSSSKRRQQ AAQQQQPDSN PTRYLGVRRR PWGRYAAEIR DPATKDRHWL GTFDTAEEAA VAYDRAARSL RGVRARTNFA
101: YPDLPPGSSI TPYLSPDLTS NDNSVQLLQP FYADPVAPLP THQPAAGGGG QNVGSEYLYG GAPDMSSLMD DISMPDDLPM IDGGEDMDFS MYGVGGNGAN
201: AAGGGGWCDA SELGAYSSTP GGGHGVYFEE GYVHSPLFSP MPAVDDAGAD GFQLGGSSSS YYY

Best Arabidopsis Sequence Match ( AT5G13910.1 )
(BLAST)

001: MNTTSSKSKK KQDDQVGTRF LGVRRRPWGR YAAEIRDPTT KERHWLGTFD TAEEAALAYD RAARSMRGTR ARTNFVYSDM PPSSSVTSIV SPDDPPPPPP
101: PPAPPSNDPV DYMMMFNQYS STDSPMLQPH CDQVDSYMFG GSQSSNSYCY SNDSSNELPP LPSDLSNSCY SQPQWTWTGD DYSSEYVHSP MFSRMPPVSD
201: SFPQGFNYFG S

Arabidopsis Description

LEPLEP [Source:UniProtKB/TrEMBL;Acc:A0A178UQP2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.