Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH70088 | Soybean | nucleus | 91.24 | 91.24 |
| KRH06790 | Soybean | nucleus | 49.27 | 57.45 |
| AT5G13910.1 | Thale cress | nucleus | 39.42 | 51.18 |
| VIT_14s0068g00860.t01 | Wine grape | nucleus | 48.18 | 50.77 |
| CDX78545 | Canola | nucleus | 38.69 | 50.0 |
| Bra006222.1-P | Field mustard | nucleus | 38.32 | 49.76 |
| CDX70526 | Canola | nucleus | 38.32 | 49.53 |
| KRH32582 | Soybean | nucleus | 16.06 | 48.35 |
| HORVU2Hr1G071470.1 | Barley | plastid | 41.97 | 43.73 |
| TraesCS2D01G286900.1 | Wheat | plastid | 41.24 | 43.13 |
| TraesCS2B01G305500.1 | Wheat | plastid | 41.24 | 43.13 |
| TraesCS2A01G288700.1 | Wheat | plastid | 41.24 | 43.13 |
| PGSC0003DMT400005596 | Potato | nucleus, plastid | 29.93 | 41.84 |
| Os04t0399800-00 | Rice | nucleus | 43.43 | 40.75 |
| Os02t0520000-00 | Rice | nucleus | 34.67 | 39.75 |
| Zm00001d025298_P001 | Maize | plastid | 39.05 | 39.34 |
| GSMUA_Achr3P02360_001 | Banana | nucleus | 38.32 | 39.03 |
| Zm00001d003871_P001 | Maize | plastid | 38.32 | 38.75 |
| EES10693 | Sorghum | plastid | 39.78 | 38.11 |
| GSMUA_Achr10P... | Banana | nucleus | 36.13 | 37.93 |
| Zm00001d016623_P001 | Maize | nucleus | 36.13 | 37.36 |
| KRG91757 | Soybean | mitochondrion, nucleus | 18.98 | 36.62 |
| KXG30301 | Sorghum | nucleus, plastid | 36.5 | 36.23 |
| PGSC0003DMT400005585 | Potato | nucleus, plastid | 38.32 | 36.21 |
| Solyc11g045680.1.1 | Tomato | nucleus, plastid | 38.32 | 36.08 |
| Solyc11g045690.1.1 | Tomato | nucleus, plastid | 37.59 | 34.11 |
| KRH35019 | Soybean | nucleus, plastid | 18.61 | 32.48 |
| KRH26242 | Soybean | nucleus | 14.96 | 31.78 |
| Bra023440.1-P | Field mustard | nucleus | 37.96 | 30.86 |
| KRH21385 | Soybean | nucleus | 18.25 | 30.67 |
| KRH55195 | Soybean | nucleus | 20.44 | 30.6 |
| CDX91091 | Canola | nucleus | 37.59 | 30.29 |
| KRH27281 | Soybean | nucleus | 21.17 | 30.05 |
| KRH22040 | Soybean | nucleus | 21.17 | 30.05 |
| KRH10926 | Soybean | nucleus | 18.61 | 29.65 |
| CDX85621 | Canola | nucleus | 36.86 | 29.53 |
| CDY72607 | Canola | nucleus | 33.94 | 28.79 |
| Bra008793.1-P | Field mustard | nucleus | 33.58 | 28.66 |
| KRH67315 | Soybean | nucleus | 17.15 | 27.33 |
| KRH55920 | Soybean | nucleus | 19.71 | 25.96 |
| KRH14810 | Soybean | nucleus | 19.71 | 25.59 |
| KRH73332 | Soybean | nucleus | 19.71 | 25.12 |
| KRH25634 | Soybean | nucleus | 18.61 | 24.88 |
| KRH73797 | Soybean | nucleus | 20.07 | 24.77 |
| KRH14334 | Soybean | nucleus | 20.07 | 24.77 |
| KRH46237 | Soybean | nucleus | 18.98 | 24.76 |
| KRH10927 | Soybean | nucleus | 19.71 | 24.66 |
| KRG98699 | Soybean | nucleus | 18.98 | 24.53 |
| KRH45546 | Soybean | nucleus | 16.06 | 24.44 |
| KRH21384 | Soybean | nucleus | 19.71 | 24.32 |
| KRH11206 | Soybean | nucleus | 25.55 | 22.44 |
| KRH21045 | Soybean | nucleus | 25.55 | 21.74 |
| KRH50906 | Soybean | nucleus | 27.01 | 21.39 |
| KRH02219 | Soybean | nucleus | 26.64 | 20.62 |
| KRH74517 | Soybean | nucleus | 24.82 | 18.73 |
| KRG99434 | Soybean | nucleus | 23.72 | 18.36 |
| KRH45585 | Soybean | nucleus | 23.36 | 18.08 |
| KRH69639 | Soybean | nucleus | 25.18 | 17.65 |
| KRH75649 | Soybean | nucleus | 17.52 | 17.33 |
Protein Annotations
| EntrezGene:100809600 | MapMan:15.5.7.1 | Gene3D:3.30.730.10 | EMBL:ACUP02010171 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| InterPro:DNA-bd_dom_sf | EnsemblPlantsGene:GLYMA_16G148700 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| UniProt:I1MNQ2 | InterPro:IPR001471 | InterPro:IPR036955 | EnsemblPlants:KRH08427 | ProteinID:KRH08427 | ProteinID:KRH08427.1 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31677 | PANTHER:PTHR31677:SF9 | SMART:SM00380 |
| SUPFAM:SSF54171 | UniParc:UPI000211DAAB | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr16:+:30958167..30959490
Molecular Weight (calculated)
29658.6 Da
IEP (calculated)
4.630
GRAVY (calculated)
-0.706
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: MKPYTSSPSS SKSKKKPTTT QQDHETAWGG RYLGVRRRPW GRYAAEIRDP STKERHWLGT FDTAEEAALA YDKAARSMRG SRARTNFIYP DTPPGSSVTS
101: ILSPDEQTQT QIHQAQEELS SLFNPNPFPQ PDPNPQFSLC GFSGIPNTPT FSATEEIASS GGYSYSYGYT EGGTGVESSH FKLFDDGETQ LPPLPPDITS
201: SMGYEMSNGL YGNDVGFSDP SCGANASGSG YPYSGFESGD YVVHSPLFSA MPSVSDNVAT GHEGFDLGSS SYFF
101: ILSPDEQTQT QIHQAQEELS SLFNPNPFPQ PDPNPQFSLC GFSGIPNTPT FSATEEIASS GGYSYSYGYT EGGTGVESSH FKLFDDGETQ LPPLPPDITS
201: SMGYEMSNGL YGNDVGFSDP SCGANASGSG YPYSGFESGD YVVHSPLFSA MPSVSDNVAT GHEGFDLGSS SYFF
001: MNTTSSKSKK KQDDQVGTRF LGVRRRPWGR YAAEIRDPTT KERHWLGTFD TAEEAALAYD RAARSMRGTR ARTNFVYSDM PPSSSVTSIV SPDDPPPPPP
101: PPAPPSNDPV DYMMMFNQYS STDSPMLQPH CDQVDSYMFG GSQSSNSYCY SNDSSNELPP LPSDLSNSCY SQPQWTWTGD DYSSEYVHSP MFSRMPPVSD
201: SFPQGFNYFG S
101: PPAPPSNDPV DYMMMFNQYS STDSPMLQPH CDQVDSYMFG GSQSSNSYCY SNDSSNELPP LPSDLSNSCY SQPQWTWTGD DYSSEYVHSP MFSRMPPVSD
201: SFPQGFNYFG S
Arabidopsis Description
LEPLEP [Source:UniProtKB/TrEMBL;Acc:A0A178UQP2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.