Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G50640.1 | KRH48306 | AT2G45640.1 | 16429262 |
| AT1G50640.1 | KRH65197 | AT2G45640.1 | 16429262 |
| AT1G50640.1 | KRH51318 | AT4G38130.1 | 16429262 |
| AT1G50640.1 | KRH60609 | AT4G38130.1 | 16429262 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH73332 | Soybean | nucleus | 88.15 | 86.51 |
| GSMUA_Achr3P13010_001 | Banana | nucleus | 47.39 | 65.36 |
| GSMUA_Achr4P06170_001 | Banana | nucleus | 52.61 | 60.0 |
| VIT_12s0059g01460.t01 | Wine grape | nucleus | 57.82 | 59.8 |
| GSMUA_Achr4P04060_001 | Banana | mitochondrion | 44.08 | 58.86 |
| Solyc10g006130.1.1 | Tomato | mitochondrion, nucleus | 59.24 | 56.56 |
| PGSC0003DMT400037359 | Potato | mitochondrion, nucleus | 59.72 | 56.5 |
| KRH32582 | Soybean | nucleus | 24.17 | 56.04 |
| CDY37113 | Canola | mitochondrion, nucleus | 54.98 | 55.77 |
| GSMUA_Achr1P18230_001 | Banana | nucleus | 49.76 | 55.26 |
| KRH73797 | Soybean | nucleus | 57.35 | 54.5 |
| KRH14334 | Soybean | nucleus | 57.35 | 54.5 |
| KRH46237 | Soybean | nucleus | 54.03 | 54.29 |
| KRG98699 | Soybean | nucleus | 54.5 | 54.25 |
| Bra018864.1-P | Field mustard | nucleus | 52.13 | 54.19 |
| CDY22810 | Canola | nucleus | 52.13 | 54.19 |
| Solyc07g064890.1.1 | Tomato | nucleus | 61.61 | 54.17 |
| PGSC0003DMT400057443 | Potato | nucleus | 61.61 | 54.17 |
| AT1G50640.1 | Thale cress | mitochondrion, nucleus | 56.4 | 52.89 |
| KRH26242 | Soybean | nucleus | 28.91 | 47.29 |
| KRH55195 | Soybean | nucleus | 39.81 | 45.9 |
| GSMUA_Achr4P11430_001 | Banana | nucleus | 35.55 | 45.73 |
| KRH27281 | Soybean | nucleus | 38.86 | 42.49 |
| KRH22040 | Soybean | nucleus | 37.91 | 41.45 |
| KRH21385 | Soybean | nucleus | 30.81 | 39.88 |
| KRH55920 | Soybean | nucleus | 37.44 | 37.98 |
| KRH25634 | Soybean | nucleus | 36.49 | 37.56 |
| KRH10926 | Soybean | nucleus | 30.33 | 37.21 |
| KRH67315 | Soybean | nucleus | 29.86 | 36.63 |
| KRH10927 | Soybean | nucleus | 37.91 | 36.53 |
| KRH21384 | Soybean | nucleus | 37.44 | 35.59 |
| KRH45546 | Soybean | nucleus | 30.33 | 35.56 |
| KRG91757 | Soybean | mitochondrion, nucleus | 20.38 | 30.28 |
| KRH35019 | Soybean | nucleus, plastid | 20.38 | 27.39 |
| KRH06790 | Soybean | nucleus | 22.27 | 20.0 |
| KRH08427 | Soybean | nucleus | 25.59 | 19.71 |
| KRH70088 | Soybean | nucleus | 25.12 | 19.34 |
| KRH11206 | Soybean | nucleus | 27.96 | 18.91 |
| KRH21045 | Soybean | nucleus | 27.01 | 17.7 |
| KRH50906 | Soybean | nucleus | 28.91 | 17.63 |
| KRH02219 | Soybean | nucleus | 29.38 | 17.51 |
| KRH74517 | Soybean | nucleus | 27.01 | 15.7 |
| KRG99434 | Soybean | nucleus | 24.64 | 14.69 |
| KRH45585 | Soybean | nucleus | 24.17 | 14.41 |
| KRH69639 | Soybean | nucleus | 26.54 | 14.32 |
| KRH75649 | Soybean | nucleus | 18.01 | 13.72 |
Protein Annotations
| EntrezGene:100795557 | MapMan:15.5.7.1 | Gene3D:3.30.730.10 | EMBL:ACUP02008527 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| InterPro:DNA-bd_dom_sf | EnsemblPlantsGene:GLYMA_14G050100 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| UniProt:H2BER5 | EMBL:HQ896930 | InterPro:IPR001471 | InterPro:IPR036955 | EnsemblPlants:KRH14810 | ProteinID:KRH14810 |
| ProteinID:KRH14810.1 | ProteinID:KRH14811.1 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31677 |
| PANTHER:PTHR31677:SF17 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0002459F3B | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr14:+:3931766..3932937
Molecular Weight (calculated)
23174.7 Da
IEP (calculated)
5.327
GRAVY (calculated)
-0.722
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRGRATAAV VDPTAEQAKE TRFRGVRKRP WGRFAAEIRD PWKKQRVWLG TFDSAEDAAR AYDKAARSFR GPKAKTNFPS FPGPTDHHSS QQIPPLYQAH
101: GLSTKFEPAQ VNRPTTSGMS STVESFSGPR VPPSSSSSRK PLVVVNPIIP LDDDDDDCHS DCDSSSSVVD DQDCVLTSSF RQPLPFDLNL PPPDAAYDDD
201: DDDVPATALC L
101: GLSTKFEPAQ VNRPTTSGMS STVESFSGPR VPPSSSSSRK PLVVVNPIIP LDDDDDDCHS DCDSSSSVVD DQDCVLTSSF RQPLPFDLNL PPPDAAYDDD
201: DDDVPATALC L
001: MRRGRGSSAV AGPTVVAAIN GSVKEIRFRG VRKRPWGRFA AEIRDPWKKA RVWLGTFDSA EEAARAYDSA ARNLRGPKAK TNFPIDSSSP PPPNLRFNQI
101: RNQNQNQVDP FMDHRLFTDH QQQFPIVNRP TSSSMSSTVE SFSGPRPTTM KPATTKRYPR TPPVVPEDCH SDCDSSSSVI DDDDDIASSS RRRNPPFQFD
201: LNFPPLDCVD LFNGADDLHC TDLRL
101: RNQNQNQVDP FMDHRLFTDH QQQFPIVNRP TSSSMSSTVE SFSGPRPTTM KPATTKRYPR TPPVVPEDCH SDCDSSSSVI DDDDDIASSS RRRNPPFQFD
201: LNFPPLDCVD LFNGADDLHC TDLRL
Arabidopsis Description
ERF3Uncharacterized protein At1g50640 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV01]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.