CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH11775
KRH36781
KRH43001
KRH59117

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G24590.1	KRH11775	AT1G30490.1	17376809
AT1G24590.1	KRH36781	AT1G30490.1	17376809
AT1G24590.1	KRH43001	AT1G30490.1	17376809
AT1G24590.1	KRH59117	AT1G30490.1	17376809

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74517	Soybean	nucleus	76.98	82.92
KRH32582	Soybean	nucleus	11.51	49.45
KRH45585	Soybean	nucleus	38.87	42.94
KRG99434	Soybean	nucleus	38.62	42.66
VIT_00s0291g00030.t01	Wine grape	nucleus	41.43	39.13
KRG91757	Soybean	mitochondrion, nucleus	13.81	38.03
PGSC0003DMT400011492	Potato	nucleus	24.3	37.4
PGSC0003DMT400008830	Potato	nucleus	24.3	37.4
PGSC0003DMT400047887	Potato	nucleus	37.08	37.18
Solyc05g013540.1.1	Tomato	nucleus	36.57	37.05
CDY51586	Canola	nucleus	26.85	35.59
Bra012499.1-P	Field mustard	nucleus	26.6	35.25
Bra010972.1-P	Field mustard	nucleus	27.11	35.22
CDY03876	Canola	nucleus	26.85	35.12
CDY24422	Canola	nucleus	26.85	35.12
CDY36131	Canola	nucleus	26.85	35.12
KRH26242	Soybean	nucleus	11.51	34.88
AT1G24590.1	Thale cress	nucleus	27.11	34.64
GSMUA_Achr9P01870_001	Banana	nucleus	25.32	34.38
GSMUA_AchrUn_...	Banana	nucleus	24.3	33.93
KRH35019	Soybean	nucleus, plastid	13.55	33.76
KRH55195	Soybean	nucleus	15.35	32.79
HORVU6Hr1G053460.1	Barley	nucleus	14.83	32.77
KRH21385	Soybean	nucleus	13.55	32.52
KRH22040	Soybean	nucleus	15.6	31.61
KRH27281	Soybean	nucleus	15.35	31.09
KRH10926	Soybean	nucleus	13.04	29.65
GSMUA_Achr3P19420_001	Banana	nucleus	21.23	29.23
KRH06790	Soybean	nucleus	17.14	28.51
KRH55920	Soybean	nucleus	14.58	27.4
KRH67315	Soybean	nucleus	12.02	27.33
KRH21384	Soybean	nucleus	15.35	27.03
KRH10927	Soybean	nucleus	15.09	26.94
KRH25634	Soybean	nucleus	14.07	26.83
KRH46237	Soybean	nucleus	14.32	26.67
KRH14810	Soybean	nucleus	14.32	26.54
KRG98699	Soybean	nucleus	14.32	26.42
KRH73797	Soybean	nucleus	14.83	26.13
KRH70088	Soybean	nucleus	18.16	25.91
KRH14334	Soybean	nucleus	14.58	25.68
KRH73332	Soybean	nucleus	14.07	25.58
KRH45546	Soybean	nucleus	11.76	25.56
KRH08427	Soybean	nucleus	17.65	25.18
KRH11206	Soybean	nucleus	18.93	23.72
KRH21045	Soybean	nucleus	19.44	23.6
KRH50906	Soybean	nucleus	20.72	23.41
KRH02219	Soybean	nucleus	20.2	22.32
Zm00001d050948_P001	Maize	nucleus	16.11	21.43
EES05354	Sorghum	nucleus	16.37	20.65
KRH75649	Soybean	nucleus	14.32	20.22
TraesCS6B01G237700.1	Wheat	nucleus	15.35	20.13
TraesCS6D01G192200.1	Wheat	nucleus	15.35	20.13
TraesCS6A01G208700.1	Wheat	nucleus	15.35	20.07
Os02t0594300-00	Rice	nucleus	16.11	18.26

Protein Annotations

EntrezGene:100805376	MapMan:15.5.7.1	Gene3D:3.30.730.10	EMBL:ACUP02000723	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_02G039300	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	UniProt:K7K6B8	EnsemblPlants:KRH69639	ProteinID:KRH69639	ProteinID:KRH69639.1
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31677	PANTHER:PTHR31677:SF9	SMART:SM00380
SUPFAM:SSF54171	UniParc:UPI000196257A	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:3662408..3663583

Molecular Weight (calculated)

43271.2 Da

IEP (calculated)

6.845

GRAVY (calculated)

-0.686

Length

391 amino acids

Sequence
(BLAST)

001: MEEAMRRLNG VAPIIGPDSK GDGGLIANNP KRTSAVNKRA LREDGGGGGG GGAMRYRGVR RRPWGRYAAE IRDPQSKERR WLGTFDTAEE AACAYDCAAR
101: AMRGLKARTN FVYPTSPQPS SATTEHLFPN FNNNNNFHKH SLFNHHRNRH ITGSNTCFDH PHSVDFSAPR NPSSLNMLLF RDLIHSNPSL LSSSSTQNFH
201: DQFYNKSTST FSSLPVSPSL APPSYSMNNS CGGSLSVKMN TFPTCGTNFA EKGDDGDGFF SRESSDSGLL EEIVNKFLPR TKPSKCETTF ANPQEESLLL
301: PPLVSESTLV STGQQYYDDD MKKGFPKNEG LGVFYSDQGF PMQQFDTSNG FNSMAMENDQ NIINNAENCV VEDVFQYQEL LNAFAIRMQN A

Best Arabidopsis Sequence Match ( AT1G24590.1 )
(BLAST)

001: MEEAIMRLEG AEHRETNIHS LKRKPSRTSS TAPGSPGGVT TAKAASGAGA SGVSTIRYRG VRRRPWGRYA AEIRDPLSKE RRWLGTFDTA EEAACAYDCA
101: ARAMRGLKAR TNFVYPMPSL DSYHHRIFSS PPMNMFLLRD VLNSQSLSPL TTFAYPPCNL SNVNDVVHES FTNVNDVCED LSPKAKRSST IENESLISNI
201: FEPEPASSGL LQEIVQGFLP KPISQHASIP PKSNQQSVGV FPTMPESGFQ TDVRLADFHV EGNGFGQVKY HGELGWADHE NGFDSAKMQQ NGNGGMFYQY
301: CFHDDY

Arabidopsis Description

ESR2Ethylene-responsive transcription factor ESR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYK5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.